RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TSSK4Q6SA08 328 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 HOMER1Q86YM7 354 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 NME8Q8N427 588 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 ESR2Q92731 530 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 KLHL5Q96PQ7 755 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 RPP25Q9BUL9 199 aaKnown RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 SLC2A4RGQ9NR83 387 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 HELLSQ9NRZ9 838 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 FBXO4Q9UKT5 387 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 ANGPTL2Q9UKU9 493 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 LAMA5O15230 3695 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 EVPLQ92817 2033 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 DOCK6Q96HP0 2047 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 MYOCOSA0A1B0GUC4 107 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 B4E1Z4 1266 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 MEIS2O14770 477 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 SEMA7AO75326 666 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 GPR32O75388 356 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 PCP11498 1178 aaKnown RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 TDGF1P13385 188 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 KLRC1P26715 233 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 GBP2P32456 591 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 SHC2P98077 582 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 HTR4Q13639 388 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 KIZQ2M2Z5 673 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 GAB4Q2WGN9 574 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 N4BP2L1Q5TBK1 243 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 C15orf39Q6ZRI6 1047 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 DDX53Q86TM3 631 aaKnown RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 OXR1Q8N573 874 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 ZNF707Q96C28 371 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 GPRASP2Q96D09 838 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 RIOX1Q9H6W3 641 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 WDR6Q9NNW5 1121 aaKnown RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 SPATA6Q9NWH7 488 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 ZSCAN32Q9NX65 697 aa7.54□□□□□ -1.2
SDCBP-210ENST00000522843 GCN1Q92616 2671 aaKnown RBP7.54□□□□□ -1.2
SDCBP-210ENST00000522843 CLUHO75153 1309 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 SHISA7A6NL88 538 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 LAMTOR5O43504 91 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 PROS1P07225 676 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 CNPP09543 421 aaKnown RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 ETV3P41162 512 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 CRYBB1P53674 252 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 POLGP54098 1239 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 GPC5P78333 572 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 SEC23AQ15436 765 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 LPAL2Q16609 132 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 MCMDC2Q4G0Z9 681 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 C20orf194Q5TEA3 1177 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 FAM43BQ6ZT52 329 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 ZNF605Q86T29 641 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 NLRX1Q86UT6 975 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 GIMAP8Q8ND71 665 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 CMASQ8NFW8 434 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 EXOC6Q8TAG9 804 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 ATRIPQ8WXE1 791 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 BORCS6Q96GS4 357 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 IGSF21Q96ID5 467 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 PRMT8Q9NR22 394 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 CNOT6Q9ULM6 557 aaKnown RBP7.53□□□□□ -1.2
SDCBP-210ENST00000522843 UBIAD1Q9Y5Z9 338 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 NUMBLQ9Y6R0 609 aa7.53□□□□□ -1.2
SDCBP-210ENST00000522843 MYH15Q9Y2K3 1946 aa7.52□□□□□ -1.2
SDCBP-210ENST00000522843 IGKV6D-21A0A0A0MT36 114 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 KANSL1LA0AUZ9 987 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 TBC1D4O60343 1298 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 RFPL2O75678 378 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 VTNP04004 478 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 GALTP07902 379 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 MYBP10242 640 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 LAMP2P13473 410 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 CD72P21854 359 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 ACTR2P61160 394 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 DMWDQ09019 674 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 NMIQ13287 307 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-210ENST00000522843 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
SDCBP-210ENST00000522843 GRM4Q14833 912 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF385BQ569K4 471 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 TCERG1LQ5VWI1 586 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 DBX2Q6ZNG2 339 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 PLPPR4Q7Z2D5 763 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 PPFIBP1Q86W92 1011 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 FGF14Q92915 247 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 TMEM169Q96HH4 297 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 Q96M66 194 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 RHOBTB2Q9BYZ6 727 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms