RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SMYD5Q6GMV2 418 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PEX26Q7Z412 305 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 SLFN11Q7Z7L1 901 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 ADGRF2Q8IZF7 708 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 SYCE1Q8N0S2 351 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 C3orf58Q8NDZ4 430 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 TRIM11Q96F44 468 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 OSBPL9Q96SU4 736 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 FAM49BQ9NUQ9 324 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 ATP11BQ9Y2G3 1177 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 M0QYV0 167 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 O00370 1275 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 CYB561D2O14569 222 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 MYBL1P10243 752 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 LMO2P25791 158 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 HADHBP55084 474 aaKnown RBP16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 GRIK3Q13003 919 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 TUBB2AQ13885 445 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 MESDQ14696 234 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 NAA30Q147X3 362 aaPredicted RBP16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 TCEAL1Q15170 157 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 TUBB2BQ9BVA1 445 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 SNX25Q9H3E2 840 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 FAM124BQ9H5Z6 455 aaPredicted RBP16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 COL6A1P12109 1028 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 MMP8P22894 467 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 CYP2C18P33260 490 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 WHAMMP3Q1A5X7 153 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 GLB1LQ6UWU2 654 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 NT5DC3Q86UY8 548 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 OSTM1Q86WC4 334 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 SEPT8Q92599 483 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 AVENQ9NQS1 362 aaPredicted RBP16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
CTNNA1-236ENST00000522792 MTA2O94776 668 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 KIF4AO95239 1232 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 GJB6O95452 261 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 EOMESO95936 686 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 GJA8P48165 433 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 FAM189BP81408 668 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 RPS6KA1Q15418 735 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 CNGA2Q16280 664 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 UPP1Q16831 310 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 GOLGA7BQ2TAP0 167 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 CYP4A22Q5TCH4 519 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 UNC93AQ86WB7 457 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TOP6BLQ8N6T0 577 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 SENP8Q96LD8 212 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TSPAN16Q9UKR8 245 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 AMFRQ9UKV5 643 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 STXBP5LQ9Y2K9 1186 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TDRD15B5MCY1 1934 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 SCN5AQ14524 2016 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 I3L4J1 428 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 ENPP3O14638 875 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 WSCD1Q658N2 575 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 PPP1R2P3Q6NXS1 205 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 LIMS2Q7Z4I7 341 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TANC1Q9C0D5 1861 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 ABCB6Q9NP58 842 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 EHD2Q9NZN4 543 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TJP2Q9UDY2 1190 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 ANAPC7Q9UJX3 599 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 KIAA1257Q9ULG3 409 aa16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-236ENST00000522792 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
CTNNA1-236ENST00000522792 CTCFP49711 727 aaPredicted RBP16.37■□□□□ 0.21
CTNNA1-236ENST00000522792 TUSC3Q13454 348 aa16.37■□□□□ 0.21
CTNNA1-236ENST00000522792 PKN2Q16513 984 aaKnown RBP16.37■□□□□ 0.21
CTNNA1-236ENST00000522792 PTPN20Q4JDL3 420 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms