RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SDCBP2Q9H190 292 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 MMRN2Q9H8L6 949 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 ABI2Q9NYB9 513 aaPredicted RBP19.16■□□□□ 0.66
CLK4-211ENST00000522556 NXF1Q9UBU9 619 aaKnown RBP19.16■□□□□ 0.66
CLK4-211ENST00000522556 PPP1R3GB7ZBB8 358 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 PHACTR2O75167 634 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 MOSPD3O75425 235 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 GCLMP48507 274 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 TRPC3Q13507 836 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 NCOA4Q13772 614 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 ZACNQ401N2 412 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 INTS6LQ5JSJ4 861 aaKnown RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 SCARA5Q6ZMJ2 495 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 CLEC17AQ6ZS10 378 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 NPAS3Q8IXF0 933 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 ZC3H3Q8IXZ2 948 aaKnown RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 THEM5Q8N1Q8 247 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 GPR152Q8TDT2 470 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 ACSF2Q96CM8 615 aaPredicted RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 MMS19Q96T76 1030 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 SEPT5Q99719 369 aaPredicted RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 PI4K2AQ9BTU6 479 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 RPP25Q9BUL9 199 aaKnown RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 ZNF334Q9HCZ1 680 aaPredicted RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 CRTAC1Q9NQ79 661 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
CLK4-211ENST00000522556 GTF3C4Q9UKN8 822 aa19.15■□□□□ 0.66
CLK4-211ENST00000522556 COL4A3Q01955 1670 aa19.14■□□□□ 0.66
CLK4-211ENST00000522556 MYBPHLA2RUH7 354 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 MAPK13O15264 365 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 NARSO43776 548 aaKnown RBP19.14■□□□□ 0.65
CLK4-211ENST00000522556 LAMP2P13473 410 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 PSMC2P35998 433 aaKnown RBP19.14■□□□□ 0.65
CLK4-211ENST00000522556 CDH8P55286 799 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 ZXDAP98168 799 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 ZNF699Q32M78 642 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 MGAT5BQ3V5L5 792 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 SDHAF4Q5VUM1 108 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 RTL10Q7L3V2 364 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 TMC8Q8IU68 726 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 TMEM86AQ8N2M4 240 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
CLK4-211ENST00000522556 LRRC3Q9BY71 257 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 DPEP3Q9H4B8 488 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 KCNK12Q9HB15 430 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 LMBRD1Q9NUN5 540 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 EPS15L1Q9UBC2 864 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 CTNND2Q9UQB3 1225 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 R3HCC1Q9Y3T6 440 aaKnown RBP19.14■□□□□ 0.65
CLK4-211ENST00000522556 OBSL1O75147 1896 aa19.14■□□□□ 0.65
CLK4-211ENST00000522556 HLA-DRAP01903 254 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 PDGFRBP09619 1106 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 MYL4P12829 197 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 ALADP13716 330 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 PTPN2P17706 415 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 WARSP23381 471 aaKnown RBP19.13■□□□□ 0.65
CLK4-211ENST00000522556 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
CLK4-211ENST00000522556 PLCD3Q8N3E9 789 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 TAS1R2Q8TE23 839 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 GIPC2Q8TF65 315 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 EDAQ92838 391 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 FGF14Q92915 247 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 SYT15Q9BQS2 421 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 ACBD6Q9BR61 282 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 LRFN3Q9BTN0 628 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 CDH7Q9ULB5 785 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 SORCS3Q9UPU3 1222 aa19.13■□□□□ 0.65
CLK4-211ENST00000522556 MRPS23Q9Y3D9 190 aaKnown RBP19.13■□□□□ 0.65
CLK4-211ENST00000522556 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
CLK4-211ENST00000522556 HAPLN1P10915 354 aaPredicted RBP19.12■□□□□ 0.65
CLK4-211ENST00000522556 CCNE1P24864 410 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 PIK3CAP42336 1068 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 STX17P56962 302 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 TNNC1P63316 161 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 MYL7Q01449 175 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 TSPY1Q01534 308 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 HTR4Q13639 388 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 PARM1Q6UWI2 310 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 INTS8Q75QN2 995 aaKnown RBP19.12■□□□□ 0.65
CLK4-211ENST00000522556 NELFBQ8WX92 580 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 MYLPFQ96A32 169 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 MCRS1Q96EZ8 462 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 APOBEC3GQ9HC16 384 aaKnown RBP19.12■□□□□ 0.65
CLK4-211ENST00000522556 HMGXB4Q9UGU5 601 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 RAPGEFL1Q9UHV5 662 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 MAFFQ9ULX9 164 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 NUMBLQ9Y6R0 609 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 GREB1Q4ZG55 1949 aa19.12■□□□□ 0.65
CLK4-211ENST00000522556 NCANO14594 1321 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 CETN3O15182 167 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 CLSTN1O94985 981 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 PDGFBP01127 241 aaPredicted RBP19.11■□□□□ 0.65
CLK4-211ENST00000522556 EPB41P11171 864 aaKnown RBP19.11■□□□□ 0.65
CLK4-211ENST00000522556 KRT13P13646 458 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 CYP2F1P24903 491 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 LHX1P48742 406 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 EPHA5P54756 1037 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 ORC1Q13415 861 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms