RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 ARMCX5Q6P1M9 558 aa13.33□□□□□ -0.28
BRF2-204ENST00000522539 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.28
BRF2-204ENST00000522539 CD302Q8IX05 232 aa13.33□□□□□ -0.28
BRF2-204ENST00000522539 PNMA5Q96PV4 448 aa13.33□□□□□ -0.28
BRF2-204ENST00000522539 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
BRF2-204ENST00000522539 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
BRF2-204ENST00000522539 FAM208BQ5VWN6 2430 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 H0YCG3 227 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 OGTO15294 1046 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 HMGA1P17096 107 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 SCP2P22307 547 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 MPLP40238 635 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 SMARCB1Q12824 385 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
BRF2-204ENST00000522539 PLK5Q496M5 336 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 ARSHQ5FYA8 562 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 RIN3Q8TB24 985 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 USP13Q92995 863 aaPredicted RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 VPS45Q9NRW7 570 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 CPSF3Q9UKF6 684 aaKnown RBP13.32□□□□□ -0.28
BRF2-204ENST00000522539 DSEQ9UL01 958 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 TBX20Q9UMR3 447 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 SLC8A2Q9UPR5 921 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 WASF3Q9UPY6 502 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 CCL26Q9Y258 94 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 DERAQ9Y315 318 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 CACNA1GO43497 2377 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 MYH11P35749 1972 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 LAMA1P25391 3075 aa13.32□□□□□ -0.28
BRF2-204ENST00000522539 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 A0A0B4J269 797 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 EGFP01133 1207 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 F11P03951 625 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 PROS1P07225 676 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
BRF2-204ENST00000522539 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
BRF2-204ENST00000522539 NLRP12P59046 1061 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
BRF2-204ENST00000522539 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
BRF2-204ENST00000522539 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 TMEM119Q4V9L6 283 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 JADE1Q6IE81 842 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 SLC39A4Q6P5W5 647 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 SPPL2BQ8TCT7 592 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
BRF2-204ENST00000522539 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
BRF2-204ENST00000522539 SMOC1Q9H4F8 434 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 EBF3Q9H4W6 596 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 ODF2LQ9ULJ1 636 aa13.31□□□□□ -0.28
BRF2-204ENST00000522539 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 HNRNPDLO14979 420 aaKnown RBP13.3□□□□□ -0.28
BRF2-204ENST00000522539 RNF40O75150 1001 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 NFICP08651 508 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 DRD1P21728 446 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 KCNA4P22459 653 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
BRF2-204ENST00000522539 LIG4P49917 911 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 ZNF131P52739 623 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
BRF2-204ENST00000522539 AMPD2Q01433 879 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 MGAT5BQ3V5L5 792 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 FBXO43Q4G163 708 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 TRIM68Q6AZZ1 485 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 SYT13Q7L8C5 426 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 EZH1Q92800 747 aaPredicted RBP13.3□□□□□ -0.28
BRF2-204ENST00000522539 BICD1Q96G01 975 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 GCNAQ96QF7 691 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 POLR3BQ9NW08 1133 aaPredicted RBP13.3□□□□□ -0.28
BRF2-204ENST00000522539 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 SCN1AP35498 2009 aa13.3□□□□□ -0.28
BRF2-204ENST00000522539 ANK1P16157 1881 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 ARSAP15289 507 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 AVPR1AP37288 418 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 GALK1P51570 392 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 POU5F1Q01860 360 aaKnown RBP13.29□□□□□ -0.28
BRF2-204ENST00000522539 PDGFRLQ15198 375 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 TCEAL6Q6IPX3 200 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 GIPC2Q8TF65 315 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 TCEAL3Q969E4 200 aa13.29□□□□□ -0.28
BRF2-204ENST00000522539 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms