RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 OR10T2Q8NGX3 314 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 NT5C1AQ9BXI3 368 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ELOVL4Q9GZR5 314 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 DPEP3Q9H4B8 488 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 CDH23Q9H251 3354 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 LRRC53A6NM62 1247 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 RFXAPO00287 272 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 TBC1D4O60343 1298 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 GOLGA8FQ08AF8 430 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 GOLGA8DPQ0D2H9 430 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 PSMD5Q16401 504 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 CTXN3Q4LDR2 81 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 ZNF280DQ6N043 979 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 PDXDC1Q6P996 788 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 RSPO2Q6UXX9 243 aaPredicted RBP17.35■□□□□ 0.37
LSM1-204ENST00000522515 GPIHBP1Q8IV16 184 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 FAM71AQ8IYT1 594 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 SLC4A11Q8NBS3 891 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 GDPD5Q8WTR4 605 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 TMEM209Q96SK2 561 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 TCF25Q9BQ70 676 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 TLR9Q9NR96 1032 aa17.35■□□□□ 0.37
LSM1-204ENST00000522515 MRPL17Q9NRX2 175 aaKnown RBP17.35■□□□□ 0.37
LSM1-204ENST00000522515 LUC7L2Q9Y383 392 aaKnown RBP17.35■□□□□ 0.37
LSM1-204ENST00000522515 H7C4K7 107 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 CYP26A1O43174 497 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 LILRB3O75022 631 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ATP2C2O75185 946 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 CALCAP01258 141 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 RPL17P18621 184 aaKnown RBP17.34■□□□□ 0.37
LSM1-204ENST00000522515 CLCN1P35523 988 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 KRT9P35527 623 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 SOX5P35711 763 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 STAT1P42224 750 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ZNF132P52740 706 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
LSM1-204ENST00000522515 ZBED6P86452 979 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 CCDC142Q17RM4 750 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ACOT1Q86TX2 421 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 TMEM176AQ96HP8 235 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 SYT15Q9BQS2 421 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ACP6Q9NPH0 428 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ENTPD7Q9NQZ7 604 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 MTRRQ9UBK8 725 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 MYO6Q9UM54 1294 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 PCDHGC5Q9Y5F6 944 aa17.34■□□□□ 0.37
LSM1-204ENST00000522515 ADAM12O43184 909 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 GFPT2O94808 682 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 CXCL14O95715 111 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 OR4Q2P0C623 313 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 PCSK1P29120 753 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 IRS1P35568 1242 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 ADKP55263 362 aaKnown RBP17.33■□□□□ 0.37
LSM1-204ENST00000522515 E4F1Q66K89 784 aaPredicted RBP17.33■□□□□ 0.37
LSM1-204ENST00000522515 GPR65Q8IYL9 337 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 CRYBG2Q8N1P7 616 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 B3GALNT2Q8NCR0 500 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.37
LSM1-204ENST00000522515 CLSTN3Q9BQT9 956 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 CDH9Q9ULB4 789 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 BACE2Q9Y5Z0 518 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.37
LSM1-204ENST00000522515 HIDE1A8MVS5 230 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 FSCN2O14926 492 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 MFAP3LO75121 409 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 TPM1P09493 284 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 PTPN1P18031 435 aaKnown RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 CA8P35219 290 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 CDR1P51861 262 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 ARID5AQ03989 594 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 LRRTM3Q86VH5 581 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 GLYCTKQ8IVS8 523 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 C12orf29Q8N999 325 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 MICAL1Q8TDZ2 1067 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 TNIP3Q96KP6 325 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 CRTAC1Q9NQ79 661 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 GTF3C4Q9UKN8 822 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 IRAK3Q9Y616 596 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 COL4A4P53420 1690 aaPredicted RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 MYBPHLA2RUH7 354 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 OR6C75A6NL08 312 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 LPXNO60711 386 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 PAEPP09466 180 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 OR1D2P34982 312 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 ARPP19P56211 112 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 TSPY1Q01534 308 aa17.32■□□□□ 0.36
LSM1-204ENST00000522515 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
LSM1-204ENST00000522515 SFMBT2Q5VUG0 894 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms