RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 CEP83Q9Y592 693 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 BUB1BO60566 1050 aaPredicted RBP28.92■■■□□ 2.22
TRNP1-201ENST00000522111 LSM8O95777 96 aaKnown RBP28.92■■■□□ 2.22
TRNP1-201ENST00000522111 VDRP11473 427 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 AMPD2Q01433 879 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 TMEM35BQ8NCS4 154 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 SNX25Q9H3E2 840 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 TBX21Q9UL17 535 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 HYOU1Q9Y4L1 999 aa28.92■■■□□ 2.22
TRNP1-201ENST00000522111 I3L4J1 428 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 B3GAT3O94766 335 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 MICAL2O94851 1124 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 CYP1A2P05177 515 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 GNL1P36915 607 aaPredicted RBP28.91■■■□□ 2.22
TRNP1-201ENST00000522111 TUSC3Q13454 348 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 WDTC1Q8N5D0 677 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 SENP8Q96LD8 212 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 TMEM106CQ9BVX2 250 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 TMEM161AQ9NX61 479 aa28.91■■■□□ 2.22
TRNP1-201ENST00000522111 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.91■■■□□ 2.22
TRNP1-201ENST00000522111 M0QYV0 167 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 O00370 1275 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 RPL9P32969 192 aaKnown RBP28.9■■■□□ 2.22
TRNP1-201ENST00000522111 WSCD1Q658N2 575 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 ZNF564Q8TBZ8 553 aaPredicted RBP28.9■■■□□ 2.22
TRNP1-201ENST00000522111 APBB2Q92870 758 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 TIMM13Q9Y5L4 95 aaPredicted RBP28.9■■■□□ 2.22
TRNP1-201ENST00000522111 SAR1BQ9Y6B6 198 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 F8W810 466 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 B4GALT3O60512 393 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 CLTBP09497 229 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 NOMO2Q5JPE7 1267 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 PAPD7Q5XG87 772 aaKnown RBP28.9■■■□□ 2.22
TRNP1-201ENST00000522111 DSTYKQ6XUX3 929 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 ZNF280BQ86YH2 543 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 PHF13Q86YI8 300 aaPredicted RBP28.9■■■□□ 2.22
TRNP1-201ENST00000522111 TOP6BLQ8N6T0 577 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 BTBD6Q96KE9 485 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 TLR10Q9BXR5 811 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 TSPAN16Q9UKR8 245 aa28.9■■■□□ 2.22
TRNP1-201ENST00000522111 TMEM110-MUSTN1A8MSY1 372 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 SMYD5Q6GMV2 418 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 UNC93AQ86WB7 457 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 OSTM1Q86WC4 334 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 LRRN4CLQ8ND94 238 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 UBA3Q8TBC4 463 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 CYTH4Q9UIA0 394 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 CDC23Q9UJX2 597 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 STXBP5LQ9Y2K9 1186 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 PCDHB7Q9Y5E2 793 aa28.89■■■□□ 2.22
TRNP1-201ENST00000522111 MMP8P22894 467 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 CXCR5P32302 372 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 GATMP50440 423 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 CDR1P51861 262 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 RNASELQ05823 741 aaKnown RBP28.88■■■□□ 2.21
TRNP1-201ENST00000522111 PPP1R26Q5T8A7 1209 aaPredicted RBP28.88■■■□□ 2.21
TRNP1-201ENST00000522111 LIMS2Q7Z4I7 341 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 MYRIPQ8NFW9 859 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 URGCPQ8TCY9 931 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 TRIM11Q96F44 468 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 PRDM5Q9NQX1 630 aaPredicted RBP28.88■■■□□ 2.21
TRNP1-201ENST00000522111 PTP4A2Q12974 167 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 CNGA2Q16280 664 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 ABI1Q8IZP0 508 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 CAPZA3Q96KX2 299 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 CARD6Q9BX69 1037 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 SNX12Q9UMY4 172 aa28.88■■■□□ 2.21
TRNP1-201ENST00000522111 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.88■■■□□ 2.21
TRNP1-201ENST00000522111 ZNF185O15231 689 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 INPPL1O15357 1258 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 DDHD2O94830 711 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 CXCL10P02778 98 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 ITGB1P05556 798 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 MYBL1P10243 752 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 ACAT1P24752 427 aaKnown RBP28.87■■■□□ 2.21
TRNP1-201ENST00000522111 CDH5P33151 784 aaPredicted RBP28.87■■■□□ 2.21
TRNP1-201ENST00000522111 PSMC1P62191 440 aaKnown RBP28.87■■■□□ 2.21
TRNP1-201ENST00000522111 GOLGA7BQ2TAP0 167 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 TIGD5Q53EQ6 642 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 CYP4A22Q5TCH4 519 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 MEI1Q5TIA1 1274 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 PEX26Q7Z412 305 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 ZNF518BQ9C0D4 1074 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 TBC1D13Q9NVG8 400 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 LRFN2Q9ULH4 789 aa28.87■■■□□ 2.21
TRNP1-201ENST00000522111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.86■■■□□ 2.21
TRNP1-201ENST00000522111 BRCC3P46736 316 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 C1QBPQ07021 282 aaKnown RBP28.86■■■□□ 2.21
TRNP1-201ENST00000522111 CCDC142Q17RM4 750 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 LIN9Q5TKA1 542 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 ERICH1Q86X53 443 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 DDX27Q96GQ7 796 aaKnown RBP28.86■■■□□ 2.21
TRNP1-201ENST00000522111 LHX5Q9H2C1 402 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 TJP2Q9UDY2 1190 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 KIAA1257Q9ULG3 409 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 GJB6O95452 261 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 CCDC130P13994 396 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 WARSP23381 471 aaKnown RBP28.86■■■□□ 2.21
TRNP1-201ENST00000522111 MESDQ14696 234 aa28.86■■■□□ 2.21
TRNP1-201ENST00000522111 NECAB2Q7Z6G3 386 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms