RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 DPH6Q7L8W6 267 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 UNC93AQ86WB7 457 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 RNF10Q8N5U6 811 aaKnown RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TOP6BLQ8N6T0 577 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 KBTBD7Q8WVZ9 684 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 ZNF606Q8WXB4 792 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 RSPH1Q8WYR4 309 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TMEM176AQ96HP8 235 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 UROC1Q96N76 676 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TWNKQ96RR1 684 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 ZSWIM1Q9BR11 485 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 IRX2Q9BZI1 471 aaPredicted RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 HMGXB4Q9UGU5 601 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 GUCA1BQ9UMX6 200 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 SNX9Q9Y5X1 595 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TTC3P53804 2025 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 KIAA0100Q14667 2235 aaKnown RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 MICAL3Q7RTP6 2002 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 NCANO14594 1321 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 ANKRD62A6NC57 917 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TRIM43BA6NCK2 446 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 THAP12O43422 761 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 KIF5CO60282 957 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TIMP1P01033 207 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 POMCP01189 267 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CFHP08603 1231 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 VDRP11473 427 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 WARSP23381 471 aaKnown RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CDH5P33151 784 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CLCNKBP51801 687 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 NDST1P52848 882 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 NOMO3P69849 1222 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CENPCQ03188 943 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TCEAL1Q15170 157 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 ZNF394Q53GI3 561 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 NOMO2Q5JPE7 1267 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CNKSR3Q6P9H4 555 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 GLB1LQ6UWU2 654 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 CD300LGQ6UXG3 332 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 SYT10Q6XYQ8 523 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 DNAAF5Q86Y56 855 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TFAP2BQ92481 460 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 SECISBP2LQ93073 1101 aaKnown RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TRIM43Q96BQ3 446 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 WDR24Q96S15 920 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 KANSL3Q9P2N6 904 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 TSR3Q9UJK0 312 aaKnown RBP10.14□□□□□ -0.79
SHPRH-209ENST00000521977 KIAA1257Q9ULG3 409 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 L1RE1Q9UN81 338 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 NME7Q9Y5B8 376 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
SHPRH-209ENST00000521977 GRXCR2A6NFK2 248 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CASTOR2A6NHX0 329 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 TMEM189-UBE2V1I3L0A0 370 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 GABRDO14764 452 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 MED7O43513 233 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 HUS1O60921 280 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 LSM8O95777 96 aaKnown RBP10.13□□□□□ -0.79
SHPRH-209ENST00000521977 FTLP02792 175 aaPredicted RBP10.13□□□□□ -0.79
SHPRH-209ENST00000521977 FGFR1P11362 822 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 IGFBP6P24592 240 aaPredicted RBP10.13□□□□□ -0.79
SHPRH-209ENST00000521977 BRD2P25440 801 aaKnown RBP10.13□□□□□ -0.79
SHPRH-209ENST00000521977 ITGB8P26012 769 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 HADHBP55084 474 aaKnown RBP10.13□□□□□ -0.79
SHPRH-209ENST00000521977 GNG11P61952 73 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PTP4A2Q12974 167 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CNGA2Q16280 664 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 ZNF569Q5MCW4 686 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PPP1R2P3Q6NXS1 205 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 NPAS4Q8IUM7 802 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 COLGALT2Q8IYK4 626 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CRYBG2Q8N1P7 616 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 SLC35F6Q8N357 371 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PDCL2Q8N4E4 241 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 APPL2Q8NEU8 664 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 SPATA18Q8TC71 538 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 URGCPQ8TCY9 931 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CYFIP2Q96F07 1278 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 SENP8Q96LD8 212 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CASD1Q96PB1 797 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PAAF1Q9BRP4 392 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 NT5C1AQ9BXI3 368 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 ZNF518BQ9C0D4 1074 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 LHX5Q9H2C1 402 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CACNG4Q9UBN1 327 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 DNAI1Q9UI46 699 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 INPP5FQ9Y2H2 1132 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 PCDHB7Q9Y5E2 793 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 CAPN6Q9Y6Q1 641 aa10.13□□□□□ -0.79
SHPRH-209ENST00000521977 MKI67P46013 3256 aaKnown RBP10.12□□□□□ -0.79
SHPRH-209ENST00000521977 MACROD2A1Z1Q3 448 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms