RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 KPNA7A9QM74 516 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 TISP43B9A030 160 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 HAPLN1P10915 354 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 GAP43P17677 238 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 PDCP20941 246 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 TGM1P22735 817 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 DDX6P26196 483 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 ADSSP30520 456 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 HOXA6P31267 233 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CNR2P34972 360 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 PNPLA4P41247 253 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 SOX9P48436 509 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CYP4F8P98187 520 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 SATB1Q01826 763 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CUL4AQ13619 759 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 PTPAQ15257 358 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 MGAT5BQ3V5L5 792 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 WSCD1Q658N2 575 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 TXNDC11Q6PKC3 985 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CRELD2Q6UXH1 353 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 SFR1Q86XK3 245 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 BRSK2Q8IWQ3 736 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 DCP1BQ8IZD4 617 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 SYNPOQ8N3V7 929 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 FAM200AQ8TCP9 573 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 BPIFB1Q8TDL5 484 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 LEO1Q8WVC0 666 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 POMGNT1Q8WZA1 660 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 LRRC3BQ96PB8 259 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 PYM1Q9BRP8 204 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 OLFML3Q9NRN5 406 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 SRPRBQ9Y5M8 271 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CACNA1BQ00975 2339 aa9.6□□□□□ -0.87
CTNNA1-229ENST00000521683 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 TCHHQ07283 1943 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 K7ESF4 209 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 LDHAP00338 332 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 RETP07949 1114 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 GARTP22102 1010 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 TXLNAP40222 546 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 TSPY1Q01534 308 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 ALCAMQ13740 583 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 CCINQ13939 588 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 TAF12Q16514 161 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 WDR44Q5JSH3 913 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 Q6ZS52 159 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 USP49Q70CQ1 688 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 LRRTM3Q86VH5 581 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 LONP2Q86WA8 852 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 LRRC52Q8N7C0 313 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 SPATA18Q8TC71 538 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 DNAJC19Q96DA6 116 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 EPSTI1Q96J88 318 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 ACCSQ96QU6 501 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 RTKNQ9BST9 563 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 PARD6AQ9NPB6 346 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 RBM12Q9NTZ6 932 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 THG1LQ9NWX6 298 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 GTSE1Q9NYZ3 720 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 FBXO2Q9UK22 296 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 CDV3Q9UKY7 258 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 PCDHB5Q9Y5E4 795 aa9.59□□□□□ -0.87
CTNNA1-229ENST00000521683 DENND4CQ5VZ89 1909 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 VPS37CA5D8V6 355 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 MYMKA6NI61 221 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 F11P03951 625 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 CSH1P0DML2 217 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 CSH2P0DML3 217 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 HMGA1P17096 107 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 AVPR1AP37288 418 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 PON2Q15165 354 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 ITPRIPL2Q3MIP1 535 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 RRAGBQ5VZM2 374 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 CCDC73Q6ZRK6 1079 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 TMEM150AQ86TG1 271 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 CMTM8Q8IZV2 173 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 TMEM86AQ8N2M4 240 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 ZFYVE19Q96K21 471 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 ACBD6Q9BR61 282 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 SLC46A2Q9BY10 475 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 IKZF4Q9H2S9 585 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 ABCB6Q9NP58 842 aa9.58□□□□□ -0.88
CTNNA1-229ENST00000521683 ABI2Q9NYB9 513 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms