RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SIX1Q15475 284 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 CYP1B1Q16678 543 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 PTPN20Q4JDL3 420 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 PPP1R15BQ5SWA1 713 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 DAB2IPQ5VWQ8 1189 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 DCUN1D2Q6PH85 259 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 DDX42Q86XP3 938 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 ZBTB9Q96C00 473 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 C18orf8Q96DM3 657 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 MCEEQ96PE7 176 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 TUBGCP4Q9UGJ1 667 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 USTQ9Y2C2 406 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 GOLGA6BA6NDN3 693 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 DAPK3O43293 454 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 TRPA1O75762 1119 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 RARAP10276 462 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 NDST1P52848 882 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 TAS2R40P59535 323 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 UBXN11Q5T124 520 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 CYP4A22Q5TCH4 519 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 TSEN2Q8NCE0 465 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 FAM71BQ8TC56 605 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 HEXIM2Q96MH2 286 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 TRIM51Q9BSJ1 452 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 APOL6Q9BWW8 343 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 UPF3AQ9H1J1 476 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 FAM114A2Q9NRY5 505 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 PCYOX1Q9UHG3 505 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 CYTH4Q9UIA0 394 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 MICAL2O94851 1124 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 HMGCRP04035 888 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 AKAP5P24588 427 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 CNGA2Q16280 664 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 GLRA4Q5JXX5 417 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 JAMLQ86YT9 394 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 MREGQ8N565 214 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 LRRC52Q8N7C0 313 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 C12orf50Q8NA57 414 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 C18orf25Q96B23 403 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 RUNDC3BQ96NL0 473 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 SPC25Q9HBM1 224 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 RASAL2Q9UJF2 1139 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 KIAA1257Q9ULG3 409 aa19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 UBQLN1Q9UMX0 589 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-210ENST00000521667 RALGAPA2Q2PPJ7 1873 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 O00370 1275 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 PPEF2O14830 753 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 PGK1P00558 417 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 PTGIRP43119 386 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 SSR1P43307 286 aaKnown RBP19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 PRKCZQ05513 592 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 SGO2Q562F6 1265 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 TTC27Q6P3X3 843 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 CCDC137Q6PK04 289 aaKnown RBP19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 CXCL17Q6UXB2 119 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 KATNAL2Q8IYT4 538 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 MAIP1Q8WWC4 291 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 ERP44Q9BS26 406 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 NT5C1AQ9BXI3 368 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 GTF2IRD1Q9UHL9 959 aa19.55■□□□□ 0.72
TRAPPC9-210ENST00000521667 M0QYV0 167 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 AGPSO00116 658 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 SEPT4O43236 478 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 GGCXP38435 758 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 VEGFBP49765 207 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 ZNF252P-AS1Q0IIN9 211 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 NBPF20Q3BBV1 942 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 ALS2CLQ60I27 953 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 DPH5Q9H2P9 285 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 WDR35Q9P2L0 1181 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 SNX9Q9Y5X1 595 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 CITO14578 2027 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 HTTP42858 3142 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 SYF2O95926 243 aaKnown RBP19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 RARBP10826 455 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 COILP38432 576 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 FNTAP49354 379 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 GSCP56915 257 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 PIGHQ14442 188 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 C9orf57Q5W0N0 161 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 DUPD1Q68J44 220 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 TSPAN18Q96SJ8 248 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 CPXM1Q96SM3 734 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 NEUROG2Q9H2A3 272 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 LRRC19Q9H756 370 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 PARP2Q9UGN5 583 aa19.54■□□□□ 0.72
TRAPPC9-210ENST00000521667 SMIM28A0A1B0GU29 152 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 M0QZ92 97 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 ATF7P17544 494 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 GPD2P43304 727 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 PSMC1P62191 440 aaKnown RBP19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 FAM193AP78312 1265 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 NKX3-2P78367 333 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 MRPS6P82932 125 aaKnown RBP19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 OGDHQ02218 1023 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 TRIM32Q13049 653 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 KCTD19Q17RG1 926 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 XKR4Q5GH76 650 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 FAM228AQ86W67 206 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms