RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 C2orf15Q8WU43 125 aaKnown RBP22.14■■□□□ 1.13
TRIM35-203ENST00000521253 EEF2KMTQ96G04 330 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 LRFN3Q9BTN0 628 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 DNAJC25Q9H1X3 360 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 SMOC2Q9H3U7 446 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 ZFP37Q9Y6Q3 630 aaPredicted RBP22.14■■□□□ 1.13
TRIM35-203ENST00000521253 IKBKBO14920 756 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 VNN1O95497 513 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 ATICP31939 592 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 PMS1P54277 932 aaKnown RBP22.13■■□□□ 1.13
TRIM35-203ENST00000521253 EPHB3P54753 998 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 TNNC1P63316 161 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 MGAT5BQ3V5L5 792 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 ZACNQ401N2 412 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 INTS6LQ5JSJ4 861 aaKnown RBP22.13■■□□□ 1.13
TRIM35-203ENST00000521253 PRSS36Q5K4E3 855 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 TRIM67Q6ZTA4 783 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 NPAS3Q8IXF0 933 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 SPPL2BQ8TCT7 592 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 RSAD2Q8WXG1 361 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 ING5Q8WYH8 240 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 SYAP1Q96A49 352 aaPredicted RBP22.13■■□□□ 1.13
TRIM35-203ENST00000521253 TCEAL4Q96EI5 215 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 PKMYT1Q99640 499 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 SEPT5Q99719 369 aaPredicted RBP22.13■■□□□ 1.13
TRIM35-203ENST00000521253 ABI2Q9NYB9 513 aaPredicted RBP22.13■■□□□ 1.13
TRIM35-203ENST00000521253 IGSF9Q9P2J2 1179 aa22.13■■□□□ 1.13
TRIM35-203ENST00000521253 DOCK8Q8NF50 2099 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 NRG2O14511 850 aaPredicted RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 CETN3O15182 167 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 TRIM49P0CI25 452 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 TRIM49CP0CI26 452 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 KRT13P13646 458 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 CEBPBP17676 345 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 BMP6P22004 513 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 WARSP23381 471 aaKnown RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 LMO2P25791 158 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 PCSK1P29120 753 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 CCR2P41597 374 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 TUFMP49411 452 aaKnown RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 NFE2Q16621 373 aaPredicted RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 CCDC142Q17RM4 750 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 ANKRD40Q6AI12 368 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 PDZD4Q76G19 769 aaPredicted RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 SV2AQ7L0J3 742 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 UBALD2Q8IYN6 164 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 ST13P5Q8NFI4 369 aaPredicted RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 TSG101Q99816 390 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 MRPL45Q9BRJ2 306 aaKnown RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 VRTNQ9H8Y1 702 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 ASAH2Q9NR71 780 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 NXF1Q9UBU9 619 aaKnown RBP22.12■■□□□ 1.13
TRIM35-203ENST00000521253 GTF3C4Q9UKN8 822 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 PCDHB5Q9Y5E4 795 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 NOTCH4Q99466 2003 aa22.12■■□□□ 1.13
TRIM35-203ENST00000521253 TECTAO75443 2155 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 TRIM49BA6NDI0 452 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 PRR33A8MZF0 331 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 ANHXE9PGG2 379 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 BIN1O00499 593 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 HAPLN1P10915 354 aaPredicted RBP22.11■■□□□ 1.13
TRIM35-203ENST00000521253 CD44P16070 742 aaKnown RBP22.11■■□□□ 1.13
TRIM35-203ENST00000521253 EPHA5P54756 1037 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 ENPEPQ07075 957 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 SIGLEC14Q08ET2 396 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 TDGQ13569 410 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 STIM1Q13586 685 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 HTR4Q13639 388 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 MORC3Q14149 939 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 ZNF699Q32M78 642 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 CYP4A22Q5TCH4 519 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 CLEC17AQ6ZS10 378 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 ELMO3Q96BJ8 720 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 MKNK1Q9BUB5 465 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 LRRC3Q9BY71 257 aa22.11■■□□□ 1.13
TRIM35-203ENST00000521253 MYO10Q9HD67 2058 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 MYBPHLA2RUH7 354 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 TMEM221A6NGB7 291 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 M0R296 226 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 ZNF197O14709 1029 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 PSMA7O14818 248 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 TACC1O75410 805 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 MYL4P12829 197 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 ATF6P18850 670 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 GCLMP48507 274 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 PSMC1P62191 440 aaKnown RBP22.1■■□□□ 1.13
TRIM35-203ENST00000521253 LRRC63Q05C16 580 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 PPP3CAQ08209 521 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 CAMK4Q16566 473 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 POTEHQ6S545 545 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 TMC8Q8IU68 726 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 ZC3H3Q8IXZ2 948 aaKnown RBP22.1■■□□□ 1.13
TRIM35-203ENST00000521253 LEMD2Q8NC56 503 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 PSMG2Q969U7 264 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 NXPE3Q969Y0 559 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 MCRS1Q96EZ8 462 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 DHTKD1Q96HY7 919 aaPredicted RBP22.1■■□□□ 1.13
TRIM35-203ENST00000521253 LPIN3Q9BQK8 851 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 SYT15Q9BQS2 421 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 PI4K2AQ9BTU6 479 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms