RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SNX24Q9Y343 169 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 ALG6Q9Y672 507 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 COL4A4P53420 1690 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 LCHNA4D1U4 455 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM86C2PA6NEL3 165 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 RIPK2O43353 540 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 CAND2O75155 1236 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 SUN1O94901 812 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 LYPLA2O95372 231 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 CYP1A2P05177 515 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 VIMP08670 466 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ITIH2P19823 946 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 TMOD1P28289 359 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 JAK3P52333 1124 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 BPIFB4P59827 614 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 CENPCQ03188 943 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 NR1H3Q13133 447 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 BFSP2Q13515 415 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 MESDQ14696 234 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 LY6KQ17RY6 165 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ZC2HC1CQ53FD0 456 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ZDHHC24Q6UX98 284 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF677Q86XU0 584 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 HERC6Q8IVU3 1022 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC63Q8NA47 563 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 AFG1LQ8WV93 481 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 ART4Q93070 314 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 SNF8Q96H20 258 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 NT5C1BQ96P26 610 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 STRA6Q9BX79 667 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 SEZ6LQ9BYH1 1024 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 UNC45AQ9H3U1 944 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 EPHX3Q9H6B9 360 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 PPCSQ9HAB8 311 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 AVENQ9NQS1 362 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 MAP3K20Q9NYL2 800 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 GRHL1Q9NZI5 618 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 KCNG1Q9UIX4 513 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 PCDHA3Q9Y5H8 950 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 TANC1Q9C0D5 1861 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 TRANK1O15050 2925 aa9.16□□□□□ -0.94
CTNNA1-223ENST00000520520 MYH11P35749 1972 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 TLDC2A0PJX2 215 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 IPO5O00410 1097 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 ATF2P15336 505 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 COMTP21964 271 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 RFC2P35250 354 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 FLT3P36888 993 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 PLA2G5P39877 138 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 GSCP56915 257 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 DEFB103AP81534 67 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 CDR2Q01850 454 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 PTK6Q13882 451 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 LIN9Q5TKA1 542 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 KRT39Q6A163 491 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 SMYD5Q6GMV2 418 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 GDF6Q6KF10 455 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 CRELD2Q6UXH1 353 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 PPP1R21Q6ZMI0 780 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM72Q6ZMU5 477 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM71AQ8IYT1 594 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 FUKQ8N0W3 1084 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 PRELID2Q8N945 189 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 RDM1Q8NG50 284 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 OLIG1Q8TAK6 271 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 FBXO25Q8TCJ0 367 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 CCT6BQ92526 530 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 ALG3Q92685 438 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 HLA-CQ95604 372 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 C18orf8Q96DM3 657 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 FIZ1Q96SL8 496 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 MXRA8Q9BRK3 442 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 NUP85Q9BW27 656 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 C1QTNF1Q9BXJ1 281 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM7Q9C029 511 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC113Q9H0I3 377 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 LRRC19Q9H756 370 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 ATP6V0A4Q9HBG4 840 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 TMEM8AQ9HCN3 771 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 TBC1D22BQ9NU19 505 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 NKIRAS1Q9NYS0 192 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 HSPBP1Q9NZL4 362 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 CNOT8Q9UFF9 292 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 ASIC3Q9UHC3 531 aa9.15□□□□□ -0.94
CTNNA1-223ENST00000520520 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
CTNNA1-223ENST00000520520 TRIP12Q14669 1992 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-223ENST00000520520 PTPRSQ13332 1948 aa9.14□□□□□ -0.95
CTNNA1-223ENST00000520520 RBM47A0AV96 593 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-223ENST00000520520 A6NJR5 290 aa9.14□□□□□ -0.95
CTNNA1-223ENST00000520520 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms