RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 EP300Q09472 2414 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-220ENST00000519767 ZNF233A6NK53 670 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 SOAT2O75908 522 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 LMNAP02545 664 aaKnown RBP27.26■■□□□ 1.95
VEGFA-220ENST00000519767 HAPLN1P10915 354 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-220ENST00000519767 GABRR2P28476 465 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 WNT7BP56706 349 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 SHC4Q6S5L8 630 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 ARID3BQ8IVW6 561 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-220ENST00000519767 SPATA18Q8TC71 538 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 NOC3LQ8WTT2 800 aaKnown RBP27.26■■□□□ 1.95
VEGFA-220ENST00000519767 C7orf25Q9BPX7 421 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 ACBD6Q9BR61 282 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 PDE11AQ9HCR9 933 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 OBP2AQ9NY56 170 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 PCDHB5Q9Y5E4 795 aa27.26■■□□□ 1.95
VEGFA-220ENST00000519767 CACNA1IQ9P0X4 2223 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 SCN1AP35498 2009 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 EIF3DO15371 548 aaKnown RBP eCLIP27.25■■□□□ 1.95
VEGFA-220ENST00000519767 TARSP26639 723 aaKnown RBP27.25■■□□□ 1.95
VEGFA-220ENST00000519767 CDC25CP30307 473 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 ASIC1P78348 528 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 C1orf228Q6PIY5 440 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 ADSSL1Q8N142 457 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 PDCL2Q8N4E4 241 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 ZNF507Q8TCN5 953 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 CFAP45Q9UL16 551 aa27.25■■□□□ 1.95
VEGFA-220ENST00000519767 DPYSL4O14531 572 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 CHADO15335 359 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 TMEM191BP0C7N4 346 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 SNRPFP62306 86 aaKnown RBP27.24■■□□□ 1.95
VEGFA-220ENST00000519767 MYL7Q01449 175 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 FCHO2Q0JRZ9 810 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 GPR158Q5T848 1215 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 FOXD4L5Q5VV16 416 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-220ENST00000519767 MAML2Q8IZL2 1156 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-220ENST00000519767 CXorf38Q8TB03 319 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 FOXD4L4Q8WXT5 416 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-220ENST00000519767 MSANTD3Q96H12 275 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 ANKRD36BP1Q96IX9 119 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 GCNAQ96QF7 691 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 TASP1Q9H6P5 420 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 FAM13BQ9NYF5 915 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 R4GN57 208 aa27.24■■□□□ 1.95
VEGFA-220ENST00000519767 SHISA7A6NL88 538 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 F13A1P00488 732 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 KRT19P08727 400 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 ATF6P18850 670 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 LHX1P48742 406 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 MYO1EQ12965 1108 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 FZD5Q13467 585 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 DUOXA2Q1HG44 320 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 MAMSTRQ6ZN01 415 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 EPM2AIP1Q7L775 607 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-220ENST00000519767 TOP6BLQ8N6T0 577 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 CSGALNACT1Q8TDX6 532 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 FAM3CQ92520 227 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 INTS13Q9NVM9 706 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 ABI2Q9NYB9 513 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-220ENST00000519767 L1RE1Q9UN81 338 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 PIAS3Q9Y6X2 628 aa27.23■■□□□ 1.95
VEGFA-220ENST00000519767 ANK1P16157 1881 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 POLR2DO15514 142 aaKnown RBP27.22■■□□□ 1.95
VEGFA-220ENST00000519767 TNNC2P02585 160 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 ME1P48163 572 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 BFSP1Q12934 665 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 FAM26FQ5R3K3 315 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 STXBP5Q5T5C0 1151 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 DPH6Q7L8W6 267 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 GLIS3Q8NEA6 775 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 GIPC2Q8TF65 315 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 LEO1Q8WVC0 666 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-220ENST00000519767 HPS3Q969F9 1004 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 IER2Q9BTL4 223 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 MKNK1Q9BUB5 465 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 C8orf33Q9H7E9 229 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-220ENST00000519767 ABCB6Q9NP58 842 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 DDX43Q9NXZ2 648 aaKnown RBP27.22■■□□□ 1.95
VEGFA-220ENST00000519767 HSPBP1Q9NZL4 362 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 SNX9Q9Y5X1 595 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 FRYLO94915 3013 aa27.22■■□□□ 1.95
VEGFA-220ENST00000519767 SOBPA7XYQ1 873 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 ARNTLO00327 626 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 HOXD13P35453 343 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 CSTF1Q05048 431 aaKnown RBP27.21■■□□□ 1.95
VEGFA-220ENST00000519767 ARHGAP29Q52LW3 1261 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 UNC13DQ70J99 1090 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 ZNF687Q8N1G0 1237 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 RSPRY1Q96DX4 576 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 MTMR12Q9C0I1 747 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 IL21Q9HBE4 155 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 SIX4Q9UIU6 781 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 PCDHA7Q9UN72 937 aa27.21■■□□□ 1.95
VEGFA-220ENST00000519767 PVALEFA0A1B0GWK0 134 aa27.2■■□□□ 1.94
VEGFA-220ENST00000519767 PRPF40AO75400 957 aaKnown RBP27.2■■□□□ 1.94
VEGFA-220ENST00000519767 DMDP11532 3685 aa27.2■■□□□ 1.94
VEGFA-220ENST00000519767 PCSK1P29120 753 aa27.2■■□□□ 1.94
VEGFA-220ENST00000519767 RPL10AP62906 217 aaKnown RBP27.2■■□□□ 1.94
VEGFA-220ENST00000519767 FOXD4L6Q3SYB3 417 aaPredicted RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms