RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NHLH1Q02575 133 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 CYP24A1Q07973 514 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 SMARCB1Q12824 385 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 DPYDQ12882 1025 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 BFSP1Q12934 665 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PSMD6Q15008 389 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 TEAD2Q15562 447 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 SNRNP35Q16560 246 aaKnown RBP10.05□□□□□ -0.8
HDAC3-215ENST00000519474 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 GAREM2Q75VX8 874 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 MTSS1LQ765P7 747 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PDZD4Q76G19 769 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-215ENST00000519474 DPH6Q7L8W6 267 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 SHKBP1Q8TBC3 707 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PLEKHO2Q8TD55 490 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PSMG2Q969U7 264 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ELSPBP1Q96BH3 223 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PHOX2BQ99453 314 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PRRX2Q99811 253 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 KXD1Q9BQD3 176 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ACBD6Q9BR61 282 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 KCTD10Q9H3F6 313 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 MFSD1Q9H3U5 465 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF334Q9HCZ1 680 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ASB3Q9Y575 518 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 SNX9Q9Y5X1 595 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 UBE4BO95155 1302 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 STK25O00506 426 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 HCRTO43612 131 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 ATP2C2O75185 946 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 TNNC2P02585 160 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 C4BPAP04003 597 aaKnown RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 MYL1P05976 194 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 TNNI1P19237 187 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 AOC1P19801 751 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 FCARP24071 287 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 BECN1Q14457 450 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 FAM171BQ6P995 826 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 HS2ST1Q7LGA3 356 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 DCP1BQ8IZD4 617 aaKnown RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 TOP6BLQ8N6T0 577 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 LEMD2Q8NC56 503 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 SPPL2BQ8TCT7 592 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 PARD3BQ8TEW8 1205 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 GIPC2Q8TF65 315 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 C2orf15Q8WU43 125 aaKnown RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 CCDC127Q96BQ5 260 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF560Q96MR9 790 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 GPR88Q9GZN0 384 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 TRPV4Q9HBA0 871 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 ZFP14Q9HCL3 533 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 ASAH2Q9NR71 780 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 DDX43Q9NXZ2 648 aaKnown RBP10.04□□□□□ -0.8
HDAC3-215ENST00000519474 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF318Q5VUA4 2279 aa10.04□□□□□ -0.8
HDAC3-215ENST00000519474 A0A1W2PRU2 124 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 MYBPHLA2RUH7 354 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 H0Y858 1186 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 PDXKO00764 312 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 EXOC3O60645 756 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 RHOBTB3O94955 611 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 F11P03951 625 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 DLATP10515 647 aaKnown RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 HMGA1P17096 107 aaKnown RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 ATF6P18850 670 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 CYP2F1P24903 491 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 VIPR2P41587 438 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 LHX1P48742 406 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 CASP4P49662 377 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 CLDN10P78369 228 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 MYO1EQ12965 1108 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 PLD1Q13393 1074 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 MGAT5BQ3V5L5 792 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 VITQ6UXI7 678 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 ALYREFQ86V81 257 aaKnown RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 ARID3BQ8IVW6 561 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 SPATA18Q8TC71 538 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 KBTBD7Q8WVZ9 684 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 SMARCD2Q92925 531 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 LRRC3BQ96PB8 259 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 FNBP1Q96RU3 617 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms