RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LRRTM3Q86VH5 581 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 ATAD1Q8NBU5 361 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 TAS1R2Q8TE23 839 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 C2orf15Q8WU43 125 aaKnown RBP23.55■■□□□ 1.36
VEGFA-217ENST00000518538 SLC35C1Q96A29 364 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 MRPL45Q9BRJ2 306 aaKnown RBP23.55■■□□□ 1.36
VEGFA-217ENST00000518538 SRRTQ9BXP5 876 aaKnown RBP23.55■■□□□ 1.36
VEGFA-217ENST00000518538 IMPG2Q9BZV3 1241 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 WDR6Q9NNW5 1121 aaKnown RBP23.55■■□□□ 1.36
VEGFA-217ENST00000518538 POLIQ9UNA4 740 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 C19orf67A6NJJ6 358 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 P4HA1P13674 534 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 ACAT1P24752 427 aaKnown RBP23.54■■□□□ 1.36
VEGFA-217ENST00000518538 DUSP4Q13115 394 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 CCDC183Q5T5S1 534 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 MED15Q96RN5 788 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 YIPF1Q9Y548 306 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 C2orf16Q68DN1 1984 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 CLUHO75153 1309 aa23.54■■□□□ 1.36
VEGFA-217ENST00000518538 LOC730098B7Z3J9 87 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 ERCC5P28715 1186 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-217ENST00000518538 MARSP56192 900 aaKnown RBP23.53■■□□□ 1.36
VEGFA-217ENST00000518538 NFE2Q16621 373 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-217ENST00000518538 GJD3Q8N144 294 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 SPPL2BQ8TCT7 592 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 ELMO3Q96BJ8 720 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 RPGRIP1Q96KN7 1286 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 PKMYT1Q99640 499 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 CRISPLD1Q9H336 500 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 SNX25Q9H3E2 840 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 SMYD3Q9H7B4 428 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 CDH9Q9ULB4 789 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 NR2E1Q9Y466 385 aa23.53■■□□□ 1.36
VEGFA-217ENST00000518538 DENND4AQ7Z401 1863 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 HCRTO43612 131 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 LMO2P25791 158 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 SSTR3P32745 418 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-217ENST00000518538 GNL1P36915 607 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-217ENST00000518538 NOP14P78316 857 aaKnown RBP23.52■■□□□ 1.36
VEGFA-217ENST00000518538 TWF1Q12792 350 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 PLD1Q13393 1074 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CBWD6Q4V339 395 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CT47A1Q5JQC4 288 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CBWD3Q5JTY5 395 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CBWD5Q5RIA9 395 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 SPOPLQ6IQ16 392 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 GRASPQ7Z6J2 395 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CCDC150Q8NCX0 1101 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 FBXL13Q8NEE6 735 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 OR6B3Q8NGW1 331 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 SYT15Q9BQS2 421 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 PI4K2AQ9BTU6 479 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 TMLHEQ9NVH6 421 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 USTQ9Y2C2 406 aa23.52■■□□□ 1.36
VEGFA-217ENST00000518538 CCDC192P0DO97 292 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 SCARA5Q6ZMJ2 495 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 TTC9BQ8N6N2 239 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 SEMA4DQ92854 862 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 APOBEC3GQ9HC16 384 aaKnown RBP23.51■■□□□ 1.35
VEGFA-217ENST00000518538 CD320Q9NPF0 282 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 RAB20Q9NX57 234 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 ABI2Q9NYB9 513 aaPredicted RBP23.51■■□□□ 1.35
VEGFA-217ENST00000518538 DNMT3BQ9UBC3 853 aaKnown RBP23.51■■□□□ 1.35
VEGFA-217ENST00000518538 SLC27A5Q9Y2P5 690 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 COQ4Q9Y3A0 265 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 PCDHB5Q9Y5E4 795 aa23.51■■□□□ 1.35
VEGFA-217ENST00000518538 PDGFRBP09619 1106 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 SP100P23497 879 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-217ENST00000518538 ASPAP45381 313 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 RAP1GAPP47736 663 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 TUFMP49411 452 aaKnown RBP23.5■■□□□ 1.35
VEGFA-217ENST00000518538 FAM171BQ6P995 826 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 TRIM59Q8IWR1 403 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 ELMOD1Q8N336 334 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 BCO2Q9BYV7 579 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 SDCBP2Q9H190 292 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 ABCB6Q9NP58 842 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.5■■□□□ 1.353e-6■■□□□ 12.1
VEGFA-217ENST00000518538 HCFC1R1Q9NWW0 138 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 GTF3C4Q9UKN8 822 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 NME7Q9Y5B8 376 aa23.5■■□□□ 1.35
VEGFA-217ENST00000518538 MYBPHLA2RUH7 354 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 N4BP1O75113 896 aaKnown RBP23.49■■□□□ 1.35
VEGFA-217ENST00000518538 ATP2C2O75185 946 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 ALDH1A3P47895 512 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 FMO5P49326 533 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 CDH8P55286 799 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 PSMC1P62191 440 aaKnown RBP23.49■■□□□ 1.35
VEGFA-217ENST00000518538 MAPRE1Q15691 268 aaKnown RBP23.49■■□□□ 1.35
VEGFA-217ENST00000518538 MGAT5BQ3V5L5 792 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 SASS6Q6UVJ0 657 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 OTOP3Q7RTS5 596 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 TDRD5Q8NAT2 981 aaKnown RBP23.49■■□□□ 1.35
VEGFA-217ENST00000518538 FAXDC2Q96IV6 333 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 SEPT5Q99719 369 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-217ENST00000518538 NIF3L1Q9GZT8 377 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 TMEM63CQ9P1W3 806 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 CEP72Q9P209 647 aa23.49■■□□□ 1.35
VEGFA-217ENST00000518538 A8MXQ7 604 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 C2CD4DB7Z1M9 353 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms