RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 LSM14BQ9BX40 385 aaKnown RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 BCO2Q9BYV7 579 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 DNAI2Q9GZS0 605 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 SNX25Q9H3E2 840 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.194e-14■■□□□ 11.8
PABPC1-205ENST00000518196 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 C2CD2LO14523 706 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 FSCN2O14926 492 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 TEX33O43247 280 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 OAZ2O95190 189 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
PABPC1-205ENST00000518196 DNAJB1P25685 340 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-205ENST00000518196 ASPAP45381 313 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 MFAP3P55082 362 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 ERVFC1P60507 584 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 MRPL58Q14197 206 aaKnown RBP13.88□□□□□ -0.19
PABPC1-205ENST00000518196 SYCP1Q15431 976 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 PSMD5Q16401 504 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 CTXN3Q4LDR2 81 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 KIAA0319Q5VV43 1072 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 ENOSF1Q7L5Y1 443 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 LIMS2Q7Z4I7 341 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 NEK11Q8NG66 645 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 OR6B3Q8NGW1 331 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 B3GALT6Q96L58 329 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 KRTAP3-3Q9BYR6 98 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 KRTAP3-2Q9BYR7 98 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 PRDM12Q9H4Q4 367 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 FAM124BQ9H5Z6 455 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-205ENST00000518196 SMYD3Q9H7B4 428 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 UBE2TQ9NPD8 197 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-205ENST00000518196 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 LMCD1Q9NZU5 365 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 APEX2Q9UBZ4 518 aa13.88□□□□□ -0.19
PABPC1-205ENST00000518196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 OR6C75A6NL08 312 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 GABRDO14764 452 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 CSPG5O95196 566 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 WEE2P0C1S8 567 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 TRIM21P19474 475 aaKnown RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 PCSK1P29120 753 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 CDH8P55286 799 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 GCNT1Q02742 428 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 CUL2Q13617 745 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 KLHDC7AQ5VTJ3 777 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 SARM1Q6SZW1 724 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 RRAGAQ7L523 313 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 ARHGEF19Q8IW93 802 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 MRPL38Q96DV4 380 aaKnown RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 XPO4Q9C0E2 1151 aaKnown RBP13.87□□□□□ -0.19
PABPC1-205ENST00000518196 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 DAAM1Q9Y4D1 1078 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 IRAK3Q9Y616 596 aa13.87□□□□□ -0.19
PABPC1-205ENST00000518196 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 TSC2P49815 1807 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 A8MXQ7 604 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 RFX1P22670 979 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 RAP1GAPP47736 663 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 TSPY1Q01534 308 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 CAMK1Q14012 370 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 SKIV2LQ15477 1246 aaKnown RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 UNC93AQ86WB7 457 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 KBTBD7Q8WVZ9 684 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 GAS2L1Q99501 681 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 SDCBP2Q9H190 292 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 SIX2Q9NPC8 291 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 FAM207AQ9NSI2 230 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 MTRRQ9UBK8 725 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 BARX2Q9UMQ3 279 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-205ENST00000518196 SIK3Q9Y2K2 1263 aa13.86□□□□□ -0.19
PABPC1-205ENST00000518196 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
PABPC1-205ENST00000518196 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
PABPC1-205ENST00000518196 LILRB3O75022 631 aa13.85□□□□□ -0.19
PABPC1-205ENST00000518196 ADH1AP07327 375 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms