RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 STKLD1Q8NE28 680 aa18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 E2F7Q96AV8 911 aa18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 SMG9Q9H0W8 520 aaKnown RBP18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 IL21Q9HBE4 155 aa18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 DCHS1Q96JQ0 3298 aa18.66■□□□□ 0.58
CTNNA1-206ENST00000517980 CHADO15335 359 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 STX6O43752 255 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 HAPLN1P10915 354 aaPredicted RBP18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 CHRNB1P11230 501 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 GPR15P49685 360 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 POU5F1Q01860 360 aaKnown RBP18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 STK38Q15208 465 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 SV2CQ496J9 727 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 ARHGAP15Q53QZ3 475 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 SDHAF4Q5VUM1 108 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 C1orf127Q8N9H9 656 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 RUBCNQ92622 972 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 INTS4Q96HW7 963 aaKnown RBP18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 PI4K2AQ9BTU6 479 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 SLC46A2Q9BY10 475 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 BACH2Q9BYV9 841 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 RBM12Q9NTZ6 932 aaKnown RBP18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 ZSCAN32Q9NX65 697 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 RBAKQ9NYW8 714 aaPredicted RBP18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 GTSE1Q9NYZ3 720 aa18.65■□□□□ 0.58
CTNNA1-206ENST00000517980 PRAMEF12O95522 483 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 KRT19P08727 400 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 GARTP22102 1010 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 ACAT1P24752 427 aaKnown RBP18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 BFSP1Q12934 665 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 GAS6Q14393 721 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 VEPH1Q14D04 833 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 LMBRD2Q68DH5 695 aaPredicted RBP18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 BRSK2Q8IWQ3 736 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 ZBTB44Q8NCP5 570 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 CHRDQ9H2X0 955 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 ZSCAN16Q9H4T2 348 aaPredicted RBP18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 TASP1Q9H6P5 420 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 OLFML3Q9NRN5 406 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 HSFX1Q9UBD0 423 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 NUP210Q8TEM1 1887 aaPredicted RBP18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 DMXL1Q9Y485 3027 aa18.64■□□□□ 0.57
CTNNA1-206ENST00000517980 FRMD3A2A2Y4 597 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 HCRTO43612 131 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 EXTL3O43909 919 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 PRPF40AO75400 957 aaKnown RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 LDHAP00338 332 aaKnown RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 TNK2Q07912 1038 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 FCHO2Q0JRZ9 810 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 WDR44Q5JSH3 913 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 TXNDC11Q6PKC3 985 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 NT5DC4Q86YG4 428 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 DCP1BQ8IZD4 617 aaKnown RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 LINC00301Q8NCQ3 95 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 NELL1Q92832 810 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 RMDN1Q96DB5 314 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 PRMT8Q9NR22 394 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 MAGED2Q9UNF1 606 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 PCDHB5Q9Y5E4 795 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 PCDHGA2Q9Y5H1 932 aa18.63■□□□□ 0.57
CTNNA1-206ENST00000517980 K7ELQ4 463 aaPredicted RBP18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 HUS1O60921 280 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 FGF19O95750 216 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 HMGA1P17096 107 aaKnown RBP18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 HOXC13P31276 330 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 SATB1Q01826 763 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 DDR2Q16832 855 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 CCDC142Q17RM4 750 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 TMEM150AQ86TG1 271 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 OSTM1Q86WC4 334 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 CCDC65Q8IXS2 484 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 MAB21L3Q8N8X9 362 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 CXorf38Q8TB03 319 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 BPIFB1Q8TDL5 484 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 GKN1Q9NS71 199 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 DDX43Q9NXZ2 648 aaKnown RBP18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 NCDNQ9UBB6 729 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 SIX4Q9UIU6 781 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 SNX9Q9Y5X1 595 aa18.62■□□□□ 0.57
CTNNA1-206ENST00000517980 SPECC1L-ADORA2AF8WAN1 911 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 SPTLC2O15270 562 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 LILRB5O75023 590 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 F11P03951 625 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 CYP2F1P24903 491 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 CDC25CP30307 473 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 HOXD13P35453 343 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 PNPLA4P41247 253 aa18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 NASPP49321 788 aaPredicted RBP18.61■□□□□ 0.57
CTNNA1-206ENST00000517980 TSPY1Q01534 308 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms