RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 GALNTL6Q49A17 601 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TTC31Q49AM3 519 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ATP13A4Q4VNC1 1196 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CCDC38Q502W7 563 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 EAPPQ56P03 285 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ANKRD22Q5VYY1 191 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IZUMO3Q5VZ72 239 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DENND1BQ6P3S1 775 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MPZL3Q6UWV2 235 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SCARA5Q6ZMJ2 495 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SPOCD1Q6ZMY3 1216 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RGS9BPQ6ZS82 235 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TSHZ1Q6ZSZ6 1077 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 BBS12Q6ZW61 710 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ZNF534Q76KX8 674 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 OTUD6AQ7L8S5 288 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ARMC9Q7Z3E5 817 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TRABD2AQ86V40 505 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 XYLT1Q86Y38 959 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FBXO16Q8IX29 292 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RHOT1Q8IXI2 618 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LRRC34Q8IZ02 419 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GPC2Q8N158 579 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MICALL1Q8N3F8 863 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RIBC1Q8N443 379 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LRRC71Q8N4P6 559 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 NAT8LQ8N9F0 302 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SLC4A11Q8NBS3 891 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 UHMK1Q8TAS1 419 aaKnown RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DEPTORQ8TB45 409 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DENND1AQ8TEH3 1009 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TRAPPC12Q8WVT3 735 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C10orf82Q8WW14 230 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CKAP2Q8WWK9 683 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PRPF31Q8WWY3 499 aaKnown RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ZNF606Q8WXB4 792 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 BBXQ8WY36 941 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 JDP2Q8WYK2 163 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 USP6NLQ92738 828 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 COPS5Q92905 334 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ACSF2Q96CM8 615 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FAF2Q96CS3 445 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RTP4Q96DX8 246 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MCRS1Q96EZ8 462 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CHMP6Q96FZ7 201 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 BICD1Q96G01 975 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FAM167AQ96KS9 214 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IFT74Q96LB3 600 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RMDN2Q96LZ7 410 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MCEEQ96PE7 176 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CPXM1Q96SM3 734 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C11orf84Q9BUA3 381 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MSTO1Q9BUK6 570 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TRAIPQ9BWF2 469 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MRPL4Q9BYD3 311 aaKnown RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ELOVL4Q9GZR5 314 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FAM107BQ9H098 131 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ASCC2Q9H1I8 757 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CXCL16Q9H2A7 254 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FZD8Q9H461 694 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IFT122Q9HBG6 1241 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SLC40A1Q9NP59 571 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CYLDQ9NQC7 956 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PICK1Q9NRD5 415 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CISHQ9NSE2 258 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DNAJC17Q9NVM6 304 aaKnown RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 KANSL3Q9P2N6 904 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MTRF1LQ9UGC7 380 aaKnown RBP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ASIC3Q9UHC3 531 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TCEAL9Q9UHQ7 104 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DNPEPQ9ULA0 475 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 AGTPBP1Q9UPW5 1226 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TTLL3Q9Y4R7 772 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ACTL7BQ9Y614 415 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SCINQ9Y6U3 715 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IVNS1ABPQ9Y6Y0 642 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
SCARNA20.6-201ENST00000517251 NUP210Q8TEM1 1887 aaPredicted RBP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ALPK3Q96L96 1907 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MTCL1Q9Y4B5 1905 aaKnown RBP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LOC102724159A0A0B4J2E5 919 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TCRBV7S3A2A0A539 114 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GOLGA6L10A6NI86 522 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SMIM23A6NLE4 172 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 F8VP50 259 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PI4K2BG5E9Z4 385 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ACKR2O00590 384 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RASGRF2O14827 1237 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PPEF2O14830 753 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TLR3O15455 904 aaKnown RBP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RGS16O15492 202 aaPredicted RBP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PRPF4O43172 522 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CDH16O75309 829 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FAM155BO75949 473 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ERLIN2O94905 339 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 UBOX5O94941 541 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 NPTXRO95502 500 aa3.43□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ASMTLO95671 621 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms