RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 MTUS1Q9ULD2 1270 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PCDHB5Q9Y5E4 795 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MRPL42Q9Y6G3 142 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 DNAH12Q6ZR08 3092 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TRIOBPQ9H2D6 2365 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TTC3P53804 2025 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ARL5CA6NH57 179 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NT5C1B-RDH14C9J2C7 533 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NRG2O14511 850 aaPredicted RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ABLIM1O14639 778 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 OGTO15294 1046 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TGFB1I1O43294 461 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EXTL3O43909 919 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EXOC3O60645 756 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SMNDC1O75940 238 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ARHGEF15O94989 841 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LDHAP00338 332 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 THP07101 528 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLTAP09496 248 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PTMSP20962 102 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ADSSP30520 456 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 BMPR1AP36894 532 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TNFSF9P41273 254 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PRCPP42785 496 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SCNN1GP51170 649 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CYP2J2P51589 502 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SNRPFP62306 86 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TAP1Q03518 808 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PPP2R3AQ06190 1150 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SPAG1Q07617 926 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 STIM1Q13586 685 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PCSK7Q16549 785 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KYAT1Q16773 422 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GLRA4Q5JXX5 417 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZBTB41Q5SVQ8 909 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EGFLAMQ63HQ2 1017 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KLHL10Q6JEL2 608 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SYT9Q86SS6 491 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 JAZF1Q86VZ6 243 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF280BQ86YH2 543 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TRIM42Q8IWZ5 723 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SPATA20Q8TB22 786 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GOLGA5Q8TBA6 731 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SAAL1Q96ER3 474 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TGS1Q96RS0 853 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FAM213AQ9BRX8 229 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TRIM55Q9BYV6 548 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TANC1Q9C0D5 1861 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CXCL16Q9H2A7 254 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SEMA6BQ9H3T3 888 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TOPORSQ9NS56 1045 aaPredicted RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TBC1D13Q9NVG8 400 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CGNQ9P2M7 1197 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 R3HCC1Q9Y3T6 440 aaKnown RBP6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PCDHB12Q9Y5F1 795 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MYH11P35749 1972 aa6.29□□□□□ -1.4
SCARNA6.1-201ENST00000516989 UBE4BO95155 1302 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SIP14410 1827 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SMIM28A0A1B0GU29 152 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF233A6NK53 670 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LACTBL1A8MY62 500 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RFXAPO00287 272 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PDXKO00764 312 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KIAA0391O15091 583 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZC3H11AO75152 810 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TADA2AO75478 443 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 DDHD2O94830 711 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NR3C1P04150 777 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RB1P06400 928 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GALTP07902 379 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CXCL8P10145 99 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LAG3P18627 525 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 BMP6P22004 513 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CTNNB1P35222 781 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 OR1G1P47890 313 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ALDH7A1P49419 539 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 BCAR1P56945 870 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ERVK-21P61565 698 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PCDH1Q08174 1060 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ADAM9Q13443 819 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GPM6BQ13491 265 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RAB33AQ14088 237 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MORC3Q14149 939 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF423Q2M1K9 1284 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EPC2Q52LR7 807 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FOXR1Q6PIV2 292 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KCNT2Q6UVM3 1135 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ALKAL1Q6UXT8 129 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms