RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TUBE1Q9UJT0 475 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 FEM1BQ9UK73 627 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 CYP8B1Q9UNU6 501 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ANKRD6Q9Y2G4 727 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ABCB11O95342 1321 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 OTOL1A6NHN0 477 aaPredicted RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 SMAD7O15105 426 aaKnown RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 FANCGO15287 622 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 KRT86O43790 486 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 STBD1O95210 358 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 PDGFAP04085 211 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 PRR29P0C7W0 189 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 MS4A1P11836 297 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 GJA1P17302 382 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 ADORA1P30542 326 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 FKBP5Q13451 457 aaPredicted RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 DSG2Q14126 1118 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 FAM174BQ3ZCQ3 159 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 TPGS2Q68CL5 300 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 NAA16Q6N069 864 aaPredicted RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 C12orf54Q6X4T0 127 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 MRPL50Q8N5N7 158 aaKnown RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 AMER3Q8N944 861 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 ARMC2Q8NEN0 867 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 NSUN6Q8TEA1 469 aaKnown RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 APOBEC4Q8WW27 367 aaKnown RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 ITLN2Q8WWU7 325 aaPredicted RBP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 DNAAF4Q8WXU2 420 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 SSH1Q8WYL5 1049 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 C19orf60Q96EN9 201 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 NT5C1BQ96P26 610 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 AGAP2Q99490 1192 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 CORO1BQ9BR76 489 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 KANSL2Q9H9L4 492 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 CALCOCO1Q9P1Z2 691 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 TNFRSF10DQ9UBN6 386 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 ACSL6Q9UKU0 697 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 PCDHGB7Q9Y5F8 929 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 DYSFO75923 2080 aa3.64□□□□□ -1.83
SCARNA13-201ENST00000516672 ARID2Q68CP9 1835 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 A0A1B0GTQ1 180 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 B4DLN1 442 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 NFIBO00712 420 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF197O14709 1029 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 NRP1O14786 923 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 ADAMTS3O15072 1205 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 GPR182O15218 404 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 ABCB4P21439 1286 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 SREBF1P36956 1147 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 KIR3DL1P43629 444 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 MRPL12P52815 198 aaKnown RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 PLCB2Q00722 1185 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 AMPD2Q01433 879 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 RUNX3Q13761 415 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 PRR31Q5SQ13 230 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 VAX1Q5SQQ9 334 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 PDZD4Q76G19 769 aaPredicted RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 G2E3Q7L622 706 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 FJX1Q86VR8 437 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 TMEM200AQ86VY9 491 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 TRIM50Q86XT4 487 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 RNF168Q8IYW5 571 aaPredicted RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 TXNDC5Q8NBS9 432 aaKnown RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 WDR36Q8NI36 951 aaKnown RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 SAP25Q8TEE9 199 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 TMEM40Q8WWA1 233 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 MKL1Q969V6 931 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 RRP36Q96EU6 259 aaKnown RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 OSBPL2Q9H1P3 480 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 CHMP4BQ9H444 224 aaKnown RBP3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 HMG20BQ9P0W2 317 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 LUZP4Q9P127 313 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 ST6GALNAC2Q9UJ37 374 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 GINS2Q9Y248 185 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 NFE2L3Q9Y4A8 694 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 PCDHB11Q9Y5F2 797 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 PCDHGA7Q9Y5G6 932 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 ENTPD2Q9Y5L3 495 aa3.63□□□□□ -1.83
SCARNA13-201ENST00000516672 MYH8P13535 1937 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 TTC24A2A3L6 582 aaPredicted RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 MBLAC1A4D2B0 266 aaPredicted RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 MKRN2OSH3BPM6 223 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 H7C1Q1 480 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SGK1O00141 431 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 EYA2O00167 538 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 GRM8O00222 908 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 DPYSL4O14531 572 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 KIF1CO43896 1103 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ATP2C2O75185 946 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 MOSPD3O75425 235 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 GGPS1O95749 300 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ALDH2P05091 517 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 RPLP2P05387 115 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 GNAI3P08754 354 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 VARSP26640 1264 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SPAM1P38567 509 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 AFF3P51826 1226 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SNAP25P60880 206 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 KRT76Q01546 638 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms