RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 CDK5RAP1Q96SZ6 601 aaKnown RBP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 EFHD1Q9BUP0 239 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SPATA5L1Q9BVQ7 753 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 POLDIP3Q9BY77 421 aaKnown RBP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ACTRT3Q9BYD9 372 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ASPSCR1Q9BZE9 553 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 OSBPL6Q9BZF3 934 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TPSD1Q9BZJ3 242 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ARHGAP39Q9C0H5 1083 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 EPN3Q9H201 632 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MAGEH1Q9H213 219 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MRPL46Q9H2W6 279 aaKnown RBP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TOR3AQ9H497 397 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CXorf36Q9H7Y0 433 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SAP30LQ9HAJ7 183 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SMURF2Q9HAU4 748 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IL21RQ9HBE5 538 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CABP5Q9NP86 173 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CAMSAP3Q9P1Y5 1249 aaPredicted RBP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 HEY2Q9UBP5 337 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF580Q9UK33 172 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZDHHC8Q9ULC8 765 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SCAF8Q9UPN6 1271 aaKnown RBP0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 AFG3L2Q9Y4W6 797 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PCDHB7Q9Y5E2 793 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GPR45Q9Y5Y3 372 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 COX11Q9Y6N1 276 aa0.47□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TMEM272A0A1B0GTI8 110 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 TLDC2A0PJX2 215 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 A1L4Q6 167 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 SRRM3A6NNA2 597 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GOLGA6L6A8MZA4 724 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 TARM1B6A8C7 271 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 H3BUI4 141 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 INO80B-WBP1J3KQ70 363 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MTSS1O43312 755 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 SPRY2O43597 315 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 AP1G1O43747 822 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MAFKO60675 156 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 RAB11FIP3O75154 756 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GPR32O75388 356 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CDC45O75419 566 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 RFPL3O75679 317 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 DDNO94850 711 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 FSBPO95073 299 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CHGBP05060 677 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MYL3P08590 195 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CYP21A2P08686 494 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 FAM163BP0C2L3 166 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CHRNB1P11230 501 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CYP2A6P11509 494 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GYS1P13807 737 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 NCLP19338 710 aaKnown RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 EDN2P20800 178 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ENDOUP21128 410 aaKnown RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 KELP23276 732 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 DGKAP23743 735 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ATP5F1P24539 256 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CD40P25942 277 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 EPHB2P29323 1055 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CNGA1P29973 690 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ARRB2P32121 409 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 IDUAP35475 653 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 FOLR3P41439 243 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GRIA3P42263 894 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 RANGAP1P46060 587 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 NPTX2P47972 431 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 HTR6P50406 440 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CCT8P50990 548 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 RAB27AP51159 221 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 CLCN5P51795 746 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GUCY2FP51841 1108 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 PDE1AP54750 535 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 BCAR1P56945 870 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 NKX6-1P78426 367 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MRPS35P82673 323 aaKnown RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 E2F1Q01094 437 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ZNF91Q05481 1191 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MAP3K12Q12852 859 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MALLQ13021 153 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 MPP3Q13368 585 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GNL2Q13823 731 aaKnown RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 GPR162Q16538 588 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 FBXO43Q4G163 708 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 C14orf177Q52M58 125 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 HS1BP3Q53T59 392 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 C19orf54Q5BKX5 351 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 FAM76BQ5HYJ3 339 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 STRIP1Q5VSL9 837 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 LRCH2Q5VUJ6 765 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 KIAA1614Q5VZ46 1190 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 EGFLAMQ63HQ2 1017 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 SDE2Q6IQ49 451 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 RGS7BPQ6MZT1 257 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 TIGD7Q6NT04 549 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 HMBOX1Q6NT76 420 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 ZNF549Q6P9A3 640 aa0.46□□□□□ -2.34
RNU6-1049P-201ENST00000516414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms