RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 KIAA1586Q9HCI6 787 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 ABI2Q9NYB9 513 aaPredicted RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 R3HCC1Q9Y3T6 440 aaKnown RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 MTF2Q9Y483 593 aaPredicted RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 DMDP11532 3685 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 TICRRQ7Z2Z1 1910 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 ZNF233A6NK53 670 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 HEPACAM2A8MVW5 462 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 ZNF263O14978 683 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 POLR2DO15514 142 aaKnown RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 KRT19P08727 400 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 CD72P21854 359 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 GABRR2P28476 465 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 RPS9P46781 194 aaKnown RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 BFSP1Q12934 665 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 TAF12Q16514 161 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 NFE2Q16621 373 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 FOXD4L6Q3SYB3 417 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 FOXD4L3Q6VB84 417 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 UNC13DQ70J99 1090 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 EPM2AIP1Q7L775 607 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 YAF2Q8IY57 180 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 CSGALNACT2Q8N6G5 542 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 CXorf38Q8TB03 319 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 CLDN23Q96B33 292 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 LPIN3Q9BQK8 851 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 ATXN3LQ9H3M9 355 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 SPATA6Q9NWH7 488 aaPredicted RBP18.81■□□□□ 0.6
DDX41-217ENST00000515562 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 HSPBP1Q9NZL4 362 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 PCDHB5Q9Y5E4 795 aa18.81■□□□□ 0.6
DDX41-217ENST00000515562 VPS13AQ96RL7 3174 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 TNNC2P02585 160 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 HAPLN1P10915 354 aaPredicted RBP18.8■□□□□ 0.6
DDX41-217ENST00000515562 MYL7Q01449 175 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 FCHO2Q0JRZ9 810 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 MYO1EQ12965 1108 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 LRRTM3Q86VH5 581 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 ZNF507Q8TCN5 953 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 MSANTD3Q96H12 275 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 ACBD6Q9BR61 282 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 ABCB6Q9NP58 842 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 INTS13Q9NVM9 706 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 OBP2AQ9NY56 170 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 SIX4Q9UIU6 781 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 ZMYM5Q9UJ78 669 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 FBXO4Q9UKT5 387 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 PCDHA7Q9UN72 937 aa18.8■□□□□ 0.6
DDX41-217ENST00000515562 NCANO14594 1321 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 DPYSL4O14531 572 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 LAMTOR5O43504 91 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 SP9P0CG40 484 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 WEE1P30291 646 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 HOXD13P35453 343 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 SNRPFP62306 86 aaKnown RBP18.79■□□□□ 0.6
DDX41-217ENST00000515562 EHHADHQ08426 723 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 DUOXA2Q1HG44 320 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 ZNF528Q3MIS6 628 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 GPR158Q5T848 1215 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 RESP18Q5W5W9 173 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 C1orf228Q6PIY5 440 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 WDR49Q8IV35 697 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 ARID3BQ8IVW6 561 aaPredicted RBP18.79■□□□□ 0.6
DDX41-217ENST00000515562 ADGRF2Q8IZF7 708 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 MKNK1Q9BUB5 465 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 DDX43Q9NXZ2 648 aaKnown RBP18.79■□□□□ 0.6
DDX41-217ENST00000515562 SNX9Q9Y5X1 595 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 PIAS3Q9Y6X2 628 aa18.79■□□□□ 0.6
DDX41-217ENST00000515562 ARNTLO00327 626 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 CHADO15335 359 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 PCSK1P29120 753 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 LHX1P48742 406 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 MLLT6P55198 1093 aaPredicted RBP18.78■□□□□ 0.6
DDX41-217ENST00000515562 PKP1Q13835 747 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
DDX41-217ENST00000515562 INTS6LQ5JSJ4 861 aaKnown RBP18.78■□□□□ 0.6
DDX41-217ENST00000515562 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 CEP57L1Q8IYX8 460 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 CSGALNACT1Q8TDX6 532 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 FAM84AQ96KN4 292 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 IER2Q9BTL4 223 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 TASP1Q9H6P5 420 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 IL21Q9HBE4 155 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 R4GN57 208 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 FANCMQ8IYD8 2048 aa18.78■□□□□ 0.6
DDX41-217ENST00000515562 PTPRJQ12913 1337 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 PVALEFA0A1B0GWK0 134 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 SHISA7A6NL88 538 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 TGFB1I1O43294 461 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 LMNAP02545 664 aaKnown RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 CDR1P51861 262 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms