RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CYB561D2O14569 222 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 KCNK3O14649 394 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 MICAL2O94851 1124 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 KIF4AO95239 1232 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 HSPA8P11142 646 aaKnown RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 MMP8P22894 467 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CYP2C18P33260 490 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 RAB27AP51159 221 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 FAAP100Q0VG06 881 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 BFSP2Q13515 415 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 RPS6KA1Q15418 735 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CNGA2Q16280 664 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CCDC142Q17RM4 750 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TRIM60Q495X7 471 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 SGO2Q562F6 1265 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 DAB2IPQ5VWQ8 1189 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TRIM72Q6ZMU5 477 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 SLC24A5Q71RS6 500 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TMEM35BQ8NCS4 154 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 APPL2Q8NEU8 664 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TSPAN18Q96SJ8 248 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PPP1R12CQ9BZL4 782 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 ABCB6Q9NP58 842 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TULP2O00295 520 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 O00370 1275 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 PODXLO00592 558 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ENPP3O14638 875 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 MED7O43513 233 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 B4GALT3O60512 393 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 HUS1O60921 280 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ATP2C2O75185 946 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 TADA3O75528 432 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 VDRP11473 427 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 PRLRP16471 622 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 COMTP21964 271 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
CPNE4-213ENST00000515418 PNPLA4P41247 253 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 RPL7AP62424 266 aaKnown RBP9.71□□□□□ -0.86
CPNE4-213ENST00000515418 MAMLD1Q13495 774 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 TUBB2AQ13885 445 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 TCEAL1Q15170 157 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 UPP1Q16831 310 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 WHAMMP3Q1A5X7 153 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 SV2CQ496J9 727 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 CLLU1OSQ5K130 101 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 WSCD1Q658N2 575 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ERICH1Q86X53 443 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ZNF280BQ86YH2 543 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 PDCL2Q8N4E4 241 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 HASPINQ8TF76 798 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 PGBD4Q96DM1 585 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 ZNF560Q96MR9 790 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 CPXM1Q96SM3 734 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 TUBB2BQ9BVA1 445 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 SLC38A7Q9NVC3 462 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 AMFRQ9UKV5 643 aa9.71□□□□□ -0.86
CPNE4-213ENST00000515418 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPNE4-213ENST00000515418 M0QYV0 167 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 LSM8O95777 96 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 PFKMP08237 780 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 TCP1P17987 556 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 GPD2P43304 727 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 FAM189BP81408 668 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 C1QBPQ07021 282 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 ELF2Q15723 593 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 PTPN20Q4JDL3 420 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 PLEKHG4Q58EX7 1191 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 TEX35Q5T0J7 233 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 FBXO46Q6PJ61 603 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 LIMS2Q7Z4I7 341 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 DEFB128Q7Z7B8 93 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 OSTM1Q86WC4 334 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 ADGRF2Q8IZF7 708 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 NOA1Q8NC60 698 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 HES6Q96HZ4 224 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 VCPIP1Q96JH7 1222 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 SENP8Q96LD8 212 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 SNX25Q9H3E2 840 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 HIPK3Q9H422 1215 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 UVRAGQ9P2Y5 699 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 ANAPC7Q9UJX3 599 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 TSPAN16Q9UKR8 245 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 ATP11BQ9Y2G3 1177 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 CTAGE15A4D2H0 777 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 DCDC2CA8MYV0 355 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 GOLGA8SH3BPF8 625 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 DDX3YO15523 660 aaKnown RBP9.7□□□□□ -0.86
CPNE4-213ENST00000515418 B3GAT3O94766 335 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 MTA2O94776 668 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 DDHD2O94830 711 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 ITGB1P05556 798 aa9.7□□□□□ -0.86
CPNE4-213ENST00000515418 CTAGE8P0CG41 777 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms