RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 BPIFB4P59827 614 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 ZNF280DQ6N043 979 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 TMC6Q7Z403 805 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 CNGA4Q8IV77 575 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 DNAJC7Q99615 494 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 RXFP1Q9HBX9 757 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 PATJQ8NI35 1801 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 URODP06132 367 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 CCDC172P0C7W6 258 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 CASP14P31944 242 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 PRKCIP41743 596 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 RAP1GAPP47736 663 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 NDST1P52848 882 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 RAD23BP54727 409 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 SMARCB1Q12824 385 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 RAPGEF1Q13905 1077 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 BMS1Q14692 1282 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 MEA1Q16626 185 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 OSTM1Q86WC4 334 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 TMEM176AQ96HP8 235 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 PKMYT1Q99640 499 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■■■ 86.5
PDLIM5-220ENST00000514830 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
PDLIM5-220ENST00000514830 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 A8MXQ7 604 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 MFAP3LO75121 409 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 CLSTN1O94985 981 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 FERP16591 822 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 CD58P19256 250 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 LMO2P25791 158 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 CLCN1P35523 988 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 KRT9P35527 623 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 CDK17Q00537 523 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 GPM6BQ13491 265 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 CAMK1Q14012 370 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 STILQ15468 1287 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 PSMD5Q16401 504 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 IRF2BP2Q7Z5L9 587 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 SPRED2Q7Z698 418 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 OR6B3Q8NGW1 331 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 ELOVL4Q9GZR5 314 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 PCDHB4Q9Y5E5 795 aa12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-220ENST00000514830 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 AKR1B15C9JRZ8 316 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 GRM6O15303 877 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 VDRP11473 427 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 FECHP22830 423 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 DNAJB1P25685 340 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 MYH10P35580 1976 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 PLXNA3P51805 1871 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 GSDMDP57764 484 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 TSPY1Q01534 308 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 PTK2Q05397 1052 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 CTXN3Q4LDR2 81 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms