RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PRRG2O14669 202 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 IL18RAPO95256 599 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 NDUFA10O95299 355 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 TNFSF4P23510 183 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 HTR3AP46098 478 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 STT3AP46977 705 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 ZNF134P52741 427 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 RESTQ13127 1097 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 CYP2A13Q16696 494 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 FOXR2Q6PJQ5 311 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 RNF31Q96EP0 1072 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 SGCZQ96LD1 299 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 CCDC138Q96M89 665 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 RNF181Q9P0P0 153 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 TAGLN3Q9UI15 199 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 A0A1W2PS29 197 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 MBD3L4A6NDZ8 208 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 MBD3L3A6NE82 208 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 B8ZZF3 427 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 PYCARD-AS1I3L0S3 204 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 PARP1P09874 1014 aaKnown RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 VIPR2P41587 438 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 GCLCP48506 637 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 ANXA11P50995 505 aaKnown RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 MXRA7P84157 204 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 BIRC2Q13490 618 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 CD300EQ496F6 205 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 LONRF3Q496Y0 759 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 AMOTQ4VCS5 1084 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 ZDHHC24Q6UX98 284 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 TOGARAM2Q6ZUX3 1019 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 DPP9Q86TI2 863 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 SKAP1Q86WV1 359 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 ADGRG5Q8IZF4 528 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 SPICE1Q8N0Z3 855 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 OR2C3Q8N628 320 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 SLC25A43Q8WUT9 341 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 PLEKHG4BQ96PX9 1271 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 BRIP1Q9BX63 1249 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 ALOXE3Q9BYJ1 711 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 MS4A7Q9GZW8 240 aaPredicted RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 A1CFQ9NQ94 594 aaKnown RBP6.29□□□□□ -1.4
HMGCS1-207ENST00000514610 PRAMEF33A0A0G2JMD5 474 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 UNC119BA6NIH7 251 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 TMEM200CA6NKL6 621 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 E7ENX8 843 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 MYO1CO00159 1063 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 TOR1BO14657 336 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 LPXNO60711 386 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 PRAMEF10O60809 474 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 MT-ND5P03915 603 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 KLRC1P26715 233 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 LILRA4P59901 499 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 TAP2Q03519 686 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 DYRK1AQ13627 763 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 ZIK1Q3SY52 487 aaPredicted RBP6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 UNC13DQ70J99 1090 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 SPRED1Q7Z699 444 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 PRRT2Q7Z6L0 340 aaPredicted RBP6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 CLNKQ7Z7G1 428 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 CCDC33Q8N5R6 958 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 SH3RF3Q8TEJ3 882 aaPredicted RBP6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 RAPGEF4Q8WZA2 1011 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 TMEM125Q96AQ2 219 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 ZNF503Q96F45 646 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 BOD1Q96IK1 185 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 SNX22Q96L94 193 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 HEPHQ9BQS7 1158 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 MESP1Q9BRJ9 268 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 STK31Q9BXU1 1019 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 CHST8Q9H2A9 424 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 STARD7Q9NQZ5 370 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 GPRC5BQ9NZH0 403 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 DAAM1Q9Y4D1 1078 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 RAD54BQ9Y620 910 aa6.28□□□□□ -1.4
HMGCS1-207ENST00000514610 A0A1W2PPC4 97 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 C1QTNF3-AMACRE9PGA6 284 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 DDX6P26196 483 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 BMPR1AP36894 532 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 BUD31P41223 144 aaPredicted RBP6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 WNT3P56703 355 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 SCAPQ12770 1279 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 PMS2P11Q13670 270 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 IQCB1Q15051 598 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 FAM209BQ5JX69 171 aa6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 HIBCHQ6NVY1 386 aaPredicted RBP6.27□□□□□ -1.41
HMGCS1-207ENST00000514610 GAS2L3Q86XJ1 694 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms