RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 NAA15Q9BXJ9 866 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 MTMR12Q9C0I1 747 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 ADAM7Q9H2U9 754 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 GDAP2Q9NXN4 497 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 SIX4Q9UIU6 781 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 FBXL5Q9UKA1 691 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 MAFFQ9ULX9 164 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CDY1Q9Y6F8 540 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 TDRD15B5MCY1 1934 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 PTPRJQ12913 1337 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 TRIM49BA6NDI0 452 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 ARHGAP6O43182 974 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 ZMYND10O75800 440 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 FGFR1OPO95684 399 aaKnown RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 GYPCP04921 128 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 C7P10643 843 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 EPB41P11171 864 aaKnown RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 ATICP31939 592 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 ELF1P32519 619 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 MTHFRP42898 656 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 ARPP19P56211 112 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 DLG4P78352 724 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 BFSP1Q12934 665 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 GPR17Q13304 367 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 SMAD2Q15796 467 aaKnown RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 FIGNQ5HY92 759 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 MIIPQ5JXC2 388 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 RARS2Q5T160 578 aaKnown RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 WSCD1Q658N2 575 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 TPGS2Q68CL5 300 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 TMC5Q6UXY8 1006 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 GPR149Q86SP6 731 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 TMEM86AQ8N2M4 240 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 C17orf53Q8N3J3 647 aaPredicted RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 TOP6BLQ8N6T0 577 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 SUSD6Q92537 303 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 ERGIC2Q96RQ1 377 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 APOL5Q9BWW9 433 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 SRRTQ9BXP5 876 aaKnown RBP8.92□□□□□ -0.98
CCL28-204ENST00000514421 RHOBTB2Q9BYZ6 727 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 MAN1C1Q9NR34 630 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 ZDHHC7Q9NXF8 308 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.92□□□□□ -0.98
CCL28-204ENST00000514421 SNX9Q9Y5X1 595 aa8.92□□□□□ -0.98
CCL28-204ENST00000514421 KIAA1671Q9BY89 1806 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 CCDC195A0A1B0GUA6 201 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 AKR1B15C9JRZ8 316 aaPredicted RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 KIF2AO00139 706 aaPredicted RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 CCP110O43303 1012 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 MFAP3LO75121 409 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 PAPLNO95428 1278 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 IL9P15248 144 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 ATF2P15336 505 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 GTF2H1P32780 548 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 LHX1P48742 406 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 ROR1Q01973 937 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 BIRC3Q13489 604 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 NCOA4Q13772 614 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 SGSM1Q2NKQ1 1148 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 ZACNQ401N2 412 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 HSP90AA4PQ58FG1 418 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 C1orf220Q5T0J3 134 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 LIN9Q5TKA1 542 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 C15orf39Q6ZRI6 1047 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 CCDC149Q6ZUS6 474 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 LIMS2Q7Z4I7 341 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 FRMD5Q7Z6J6 570 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 CNGA4Q8IV77 575 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 TCEAL8Q8IYN2 117 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 SPATA18Q8TC71 538 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 EEF2KMTQ96G04 330 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 RIPOR3Q96MK2 946 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 NECTIN4Q96NY8 510 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 TUBGCP2Q9BSJ2 902 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 TTYH3Q9C0H2 523 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 METTL14Q9HCE5 456 aaKnown RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 PRKAG3Q9UGI9 489 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 AFF4Q9UHB7 1163 aaKnown RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 FBXW11Q9UKB1 542 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 L1RE1Q9UN81 338 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 USP15Q9Y4E8 981 aaPredicted RBP8.91□□□□□ -0.98
CCL28-204ENST00000514421 PLXNA4Q9HCM2 1894 aa8.91□□□□□ -0.98
CCL28-204ENST00000514421 A0A1W2PQJ5 194 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 WDR27A2RRH5 827 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 GABRDO14764 452 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 SLC16A3O15427 465 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 RFPL2O75678 378 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 GNA14O95837 355 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 C8AP07357 584 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 HNRNPA1P09651 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCL28-204ENST00000514421 CPB1P15086 417 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms