RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SATB1Q01826 763 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 SV2CQ496J9 727 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 TXNDC11Q6PKC3 985 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 NT5DC4Q86YG4 428 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 USP28Q96RU2 1077 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 IER2Q9BTL4 223 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 C8orf33Q9H7E9 229 aaPredicted RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 TMLHEQ9NVH6 421 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 OBP2AQ9NY56 170 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 GTSE1Q9NYZ3 720 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 DPYSL4O14531 572 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 ITGB3P05106 788 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 IDEP14735 1019 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 WEE1P30291 646 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 CDC25CP30307 473 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
SNHG4-208ENST00000514110 CTHP32929 405 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 TXLNAP40222 546 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 GPR15P49685 360 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 CCR3P51677 355 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
SNHG4-208ENST00000514110 TNK2Q07912 1038 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 TAF12Q16514 161 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 BRSK2Q8IWQ3 736 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 C1orf127Q8N9H9 656 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 STKLD1Q8NE28 680 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
SNHG4-208ENST00000514110 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 EXOC7Q9UPT5 735 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 GPR179Q6PRD1 2367 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 F5P12259 2224 aa13.16□□□□□ -0.3
SNHG4-208ENST00000514110 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 GARTP22102 1010 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PNPLA4P41247 253 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 STAT6P42226 847 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 NRLP54845 237 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 LRRC32Q14392 662 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 RSPO4Q2I0M5 234 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 Q6ZS52 159 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 RALGPS2Q86X27 583 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 DCP1BQ8IZD4 617 aaKnown RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PI4K2AQ9BTU6 479 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PANK4Q9NVE7 773 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 C2orf42Q9NWW7 574 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 DLL3Q9NYJ7 618 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 RBAKQ9NYW8 714 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
SNHG4-208ENST00000514110 MORC2Q9Y6X9 1032 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-208ENST00000514110 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 MED19A0JLT2 244 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 EXTL3O43909 919 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 F11P03951 625 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 TGM1P22735 817 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 HOXC13P31276 330 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CXCL12P48061 93 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 NLRP12P59046 1061 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 TSPY1Q01534 308 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 DMWDQ09019 674 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 BFSP1Q12934 665 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 ALCAMQ13740 583 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 PUM1Q14671 1186 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNHG4-208ENST00000514110 PON2Q15165 354 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 LPAL2Q16609 132 aa13.14□□□□□ -0.31
SNHG4-208ENST00000514110 CCDC142Q17RM4 750 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms