RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.54■□□□□ 0.08
SNF8-212ENST00000514089 SMG7Q92540 1137 aaKnown RBP15.54■□□□□ 0.08
SNF8-212ENST00000514089 MSLNLQ96KJ4 702 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 TMEM209Q96SK2 561 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 ZDHHC7Q9NXF8 308 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 ABI2Q9NYB9 513 aaPredicted RBP15.54■□□□□ 0.08
SNF8-212ENST00000514089 FBXW11Q9UKB1 542 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 CDH9Q9ULB4 789 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 SLC27A5Q9Y2P5 690 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 PCDHB5Q9Y5E4 795 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
SNF8-212ENST00000514089 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 KCNJ18B7U540 433 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 P4HA2O15460 535 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 CCL16O15467 120 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 HNRNPA1P09651 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNF8-212ENST00000514089 CD58P19256 250 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 LMO2P25791 158 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 MTHFRP42898 656 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 RAP1GAPP47736 663 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 TUFMP49411 452 aaKnown RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 KCNQ1P51787 676 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 TPM4P67936 248 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 CYP27A1Q02318 531 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 PLD1Q13393 1074 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 KCNJ12Q14500 433 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 INTS6LQ5JSJ4 861 aaKnown RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 IQCEQ6IPM2 695 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 C11orf57Q6ZUT1 292 aaPredicted RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 ATAD1Q8NBU5 361 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 C2orf15Q8WU43 125 aaKnown RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 ZNF512Q96ME7 567 aaPredicted RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 NECTIN4Q96NY8 510 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 MED15Q96RN5 788 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 SEPT5Q99719 369 aaPredicted RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 SYT15Q9BQS2 421 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 NIF3L1Q9GZT8 377 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 SMYD3Q9H7B4 428 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 CYP3A43Q9HB55 503 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
SNF8-212ENST00000514089 USP15Q9Y4E8 981 aaPredicted RBP15.53■□□□□ 0.08
SNF8-212ENST00000514089 GRXCR2A6NFK2 248 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 GABRDO14764 452 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 MBTPS2O43462 519 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 EEF1GP26641 437 aaKnown RBP15.52■□□□□ 0.08
SNF8-212ENST00000514089 EPHB3P54753 998 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 PSMC1P62191 440 aaKnown RBP15.52■□□□□ 0.08
SNF8-212ENST00000514089 YWHAEP62258 255 aaKnown RBP15.52■□□□□ 0.08
SNF8-212ENST00000514089 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 ZSCAN23Q3MJ62 389 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 VWA3BQ502W6 1294 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 TJAP1Q5JTD0 557 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 CYP26C1Q6V0L0 522 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 C4orf50Q6ZRC1 276 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 GPR149Q86SP6 731 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 OSTM1Q86WC4 334 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 TCEAL8Q8IYN2 117 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 TTC39CQ8N584 583 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 SMRP1Q8NCR6 262 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 KBTBD7Q8WVZ9 684 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 NT5C1BQ96P26 610 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 RTP3Q9BQQ7 232 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 MED10Q9BTT4 135 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 PRKD2Q9BZL6 878 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 S1PR5Q9H228 398 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
SNF8-212ENST00000514089 SEC24AO95486 1093 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 PTPN1P18031 435 aaKnown RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 ZNF165P49910 485 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 MCCD1P59942 119 aaPredicted RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 TWF1Q12792 350 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 VEPH1Q14D04 833 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 TCP11X2Q5H9J9 407 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 GBP6Q6ZN66 633 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 LRRTM3Q86VH5 581 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 PPM1KQ8N3J5 372 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 AOPEPQ8N6M6 819 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 EHBP1Q8NDI1 1231 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 TATDN2Q93075 761 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 APOBEC3GQ9HC16 384 aaKnown RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 COQ4Q9Y3A0 265 aa15.51■□□□□ 0.07
SNF8-212ENST00000514089 PRRC2BQ5JSZ5 2229 aaKnown RBP15.51■□□□□ 0.07
SNF8-212ENST00000514089 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 MTMR11A4FU01 709 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 PMM2O15305 246 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 HCRTO43612 131 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 ATP2C2O75185 946 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 PTPN2P17706 415 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 TBXAS1P24557 533 aaPredicted RBP15.5■□□□□ 0.07
SNF8-212ENST00000514089 HOXA9P31269 272 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 ASPAP45381 313 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 NDST1P52848 882 aa15.5■□□□□ 0.07
SNF8-212ENST00000514089 MDH1BQ5I0G3 518 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms