RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 NRBP2Q9NSY0 501 aa13.27□□□□□ -0.28
SDHA-216ENST00000514027 PARVAQ9NVD7 372 aa13.27□□□□□ -0.28
SDHA-216ENST00000514027 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 FOXO6A8MYZ6 492 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 ADCY3O60266 1144 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 SMIM24O75264 130 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 CST3P01034 146 aaPredicted RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 TCF4P15884 667 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 IVDP26440 423 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 ICAM3P32942 547 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 RFC5P40937 340 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 ATP13A4Q4VNC1 1196 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 PLEKHA7Q6IQ23 1121 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 ANKS1BQ7Z6G8 1248 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 PHF13Q86YI8 300 aaPredicted RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 AGAP11Q8TF27 550 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 ZNF606Q8WXB4 792 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 MCEEQ96PE7 176 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 NIFKQ9BYG3 293 aaKnown RBP13.27□□□□□ -0.29
SDHA-216ENST00000514027 MTFR1LQ9H019 292 aa13.27□□□□□ -0.29
SDHA-216ENST00000514027 BRCA1P38398 1863 aaKnown RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 KRT1P04264 644 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 KRT10P13645 584 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 LY6KQ17RY6 165 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 IZUMO3Q5VZ72 239 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 FAM160B1Q5W0V3 765 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 DLK2Q6UY11 383 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 EXOC3L1Q86VI1 746 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 KATNAL2Q8IYT4 538 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 FEZF2Q8TBJ5 459 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 ARHGEF2Q92974 986 aaKnown RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 ACSF2Q96CM8 615 aaPredicted RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 ZNF317Q96PQ6 595 aaPredicted RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 ROPN1BQ9BZX4 212 aaPredicted RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 ROPN1Q9HAT0 212 aaPredicted RBP13.26□□□□□ -0.29
SDHA-216ENST00000514027 MLXIPLQ9NP71 852 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.29
SDHA-216ENST00000514027 TBK1Q9UHD2 729 aa13.26□□□□□ -0.29
SDHA-216ENST00000514027 TTC4O95801 387 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 ALADP13716 330 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 MYL6P60660 151 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 OSTNP61366 133 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 PTP4A2Q12974 167 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 MFSD5Q6N075 450 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 TRIM50Q86XT4 487 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CCDC89Q8N998 374 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CCDC197Q8NCU1 140 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 HAUS1Q96CS2 278 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 C9orf72Q96LT7 481 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 TMEM134Q9H6X4 195 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 KCNK9Q9NPC2 374 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 SAMD15Q9P1V8 674 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CREB1P16220 341 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CETN2P41208 172 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 CAV1Q03135 178 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 NFX1Q12986 1120 aaKnown RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 CNGA2Q16280 664 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CCNG2Q16589 344 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 P3H1Q32P28 736 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 DCUN1D2Q6PH85 259 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 GADL1Q6ZQY3 521 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 SDCCAG8Q86SQ7 713 aaPredicted RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 CCDC63Q8NA47 563 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 RNF149Q8NC42 400 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 EXD1Q8NHP7 514 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 ELAC2Q9BQ52 826 aaKnown RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 MRPL4Q9BYD3 311 aaKnown RBP13.25□□□□□ -0.29
SDHA-216ENST00000514027 NINJ2Q9NZG7 142 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 LOC285556D6RIA3 1793 aa13.25□□□□□ -0.29
SDHA-216ENST00000514027 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 A0A1B0GVG6 124 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 ATP5DP30049 168 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 TRPC3Q13507 836 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms