RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TACR2P21452 398 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ECHS1P30084 290 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ADSLP30566 484 aaPredicted RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 MAP2K2P36507 400 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 CRKLP46109 303 aaKnown RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 GZMKP49863 264 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 APBA1Q02410 837 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 MALLQ13021 153 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 MTMR1Q13613 665 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 NOMO1Q15155 1222 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ADRM1Q16186 407 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ABHD15Q6UXT9 468 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 KCNK18Q7Z418 384 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 FAM83AQ86UY5 434 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ZFPM1Q8IX07 1006 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TSPEARQ8WU66 669 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 SUCLG2Q96I99 432 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 FAXDC2Q96IV6 333 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 UTP14AQ9BVJ6 771 aaKnown RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 C22orf23Q9BZE7 217 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 CCDC8Q9H0W5 538 aaPredicted RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 GPR108Q9NPR9 543 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ECHDC1Q9NTX5 307 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 AURKAIP1Q9NWT8 199 aaPredicted RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TRMT112Q9UI30 125 aaKnown RBP5.26□□□□□ -1.57
CLDND1-228ENST00000513873 GIT1Q9Y2X7 761 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 SH3BP1Q9Y3L3 701 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TSC22D4Q9Y3Q8 395 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TESMINQ9Y4I5 508 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 CEP290O15078 2479 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 SZT2Q5T011 3432 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 NPHP1O15259 732 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 CRHR1P34998 444 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 PTPN7P35236 360 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 IARSP41252 1262 aaKnown RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 MTNR1BP49286 362 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 FXR1P51114 621 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 SLC16A1P53985 500 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 EIF5P55010 431 aaKnown RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 SOX10P56693 466 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 ADAM8P78325 824 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 PTPN21Q16825 1174 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 ABCB5Q2M3G0 1257 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 CCDC152Q4G0S7 254 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 CCDC158Q5M9N0 1113 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 GORABQ5T7V8 394 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 MAMDC4Q6UXC1 1216 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 APBB1IPQ7Z5R6 666 aaPredicted RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 AACSQ86V21 672 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF808Q8N4W9 903 aaPredicted RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 MSL3Q8N5Y2 521 aaKnown RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 PPM1NQ8N819 430 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 C1orf162Q8NEQ5 155 aaPredicted RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 RILPL2Q969X0 211 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 EVI5LQ96CN4 794 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 FUBP3Q96I24 572 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 SMAD5Q99717 465 aaKnown RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 CPPED1Q9BRF8 314 aaPredicted RBP5.25□□□□□ -1.57
CLDND1-228ENST00000513873 C1QTNF3Q9BXJ4 246 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 TRIM8Q9BZR9 551 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 GPRC5DQ9NZD1 345 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 CLCA2Q9UQC9 943 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 PCDHGA2Q9Y5H1 932 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 LTBP1Q14766 1721 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 DLG5Q8TDM6 1919 aa5.25□□□□□ -1.57
CLDND1-228ENST00000513873 SH3TC1Q8TE82 1336 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 USP42Q9H9J4 1324 aaKnown RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 KDM3BQ7LBC6 1761 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 DLEC1Q9Y238 1755 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 FER1L6Q2WGJ9 1857 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 FAM171A2A8MVW0 826 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 GOLGA6L6A8MZA4 724 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 PRR5-ARHGAP8B1AHC4 643 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 EYA2O00167 538 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 ITGA10O75578 1167 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 RPS6KA4O75676 772 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 ENDOD1O94919 500 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 SLPIP03973 132 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 AGXTP21549 392 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 RFC4P35249 363 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 IGHMBP2P38935 993 aaKnown RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 MCM2P49736 904 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 MRPL49Q13405 166 aaKnown RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 NRN1LQ496H8 165 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 HSCBQ8IWL3 235 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 MB21D1Q8N884 522 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 SLC17A8Q8NDX2 589 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 SH3RF3Q8TEJ3 882 aaPredicted RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 CAPNS2Q96L46 248 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 SLC2A13Q96QE2 648 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 MPHOSPH8Q99549 860 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 DIAPH3Q9NSV4 1193 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 HECAQ9UBI9 543 aaPredicted RBP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 NIP7Q9Y221 180 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLDND1-228ENST00000513873 ZBTB1Q9Y2K1 713 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms