RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 PODNQ7Z5L7 613 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 CCDC33Q8N5R6 958 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF75CPQ92670 426 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 MXRA8Q9BRK3 442 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 TBC1D10AQ9BXI6 508 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 BAG5Q9UL15 447 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ATXN2Q99700 1313 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ZSCAN5DPP0CG00 497 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 PTDSS1P48651 473 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NFIAQ12857 509 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 RWDD4Q6NW29 188 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 KCNV1Q6PIU1 500 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NOP9Q86U38 636 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ALG3Q92685 438 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ATP6V1E2Q96A05 226 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 GCOM2Q9BZD3 368 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 C20orf96Q9NUD7 363 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 DTNAQ9Y4J8 743 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 FAM86B1E9PN63 330 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 PROSCO94903 275 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NUDT17P0C025 328 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 FAM86B2P0C5J1 330 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ECM1Q16610 540 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 HES6Q96HZ4 224 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NACA2Q9H009 215 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 OLFML3Q9NRN5 406 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 IPO11Q9UI26 975 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 MEI4A8MW99 385 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 FCHO1O14526 889 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 GJB6O95452 261 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 SREBF1P36956 1147 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 MMP13P45452 471 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ACTR2P61160 394 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 BMPR2Q13873 1038 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 CYLC2Q14093 348 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 KLC3Q6P597 504 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 IYDQ6PHW0 289 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NSUN6Q8TEA1 469 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 HAS1Q92839 578 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 CCT7Q99832 543 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 MRPL4Q9BYD3 311 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 BFARQ9NZS9 450 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 AGLP35573 1532 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 GSTA4O15217 222 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 UPP2O95045 317 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 CA8P35219 290 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 MMP10P09238 476 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 NUDT2P50583 147 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ORC1Q13415 861 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TAF12Q16514 161 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SPDYCQ5MJ68 293 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 CATSPER1Q8NEC5 780 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PSPC1Q8WXF1 523 aaKnown RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 CCDC90BQ9GZT6 254 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 FBXO28Q9NVF7 368 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 EML1O00423 815 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 DGAT1O75907 488 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 FECHP22830 423 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 DLG4P78352 724 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 NME3Q13232 169 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 CUL2Q13617 745 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 CLEC16AQ2KHT3 1053 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TFDP3Q5H9I0 405 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PRR5LQ6MZQ0 368 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF677Q86XU0 584 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TARS2Q9BW92 718 aaKnown RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 CAAP1Q9H8G2 361 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 C10orf88Q9H8K7 445 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 NOL4O94818 638 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 GH1P01241 217 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ADORA2BP29275 332 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ZBTB17Q13105 803 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 FLOT2Q14254 428 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 APLFQ8IW19 511 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 RNF149Q8NC42 400 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 RMDN2Q96LZ7 410 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 RIT2Q99578 217 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TRIM15Q9C019 465 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 IKZF4Q9H2S9 585 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 JPH1Q9HDC5 661 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PAK5Q9P286 719 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 DNPEPQ9ULA0 475 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 GRID1Q9ULK0 1009 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TAC1P20366 129 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PEX5P50542 639 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 YWHAHQ04917 246 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 B4GALNT2Q8NHY0 566 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ANKRD27Q96NW4 1050 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SLC24A2Q9UI40 661 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 AKAP10O43572 662 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 FOXD4Q12950 439 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms