RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ARHGEF35A5YM69 484 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 FAM221BA6H8Z2 402 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 OTOL1A6NHN0 477 aaPredicted RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 MEFVO15553 781 aaPredicted RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 NEMFO60524 1076 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 MED24O75448 989 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 CDKL5O76039 1030 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 CAPNS1P04632 268 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 MCF2P10911 925 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 CDC25CP30307 473 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 GALK1P51570 392 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 IRX4P78413 519 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 AMPD2Q01433 879 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 STK3Q13188 491 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 NR5A1Q13285 461 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 DMC1Q14565 340 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 THSD4Q6ZMP0 1018 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 RUFY3Q7L099 469 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 TTC9BQ8N6N2 239 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 KIFAP3Q92845 792 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 TNFRSF25Q93038 417 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 EBF3Q9H4W6 596 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 HSFX1Q9UBD0 423 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 EVLQ9UI08 416 aaPredicted RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 ZMYM5Q9UJ78 669 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 MYO16Q9Y6X6 1858 aa9.79□□□□□ -0.84
CAST-239ENST00000513666 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
CAST-239ENST00000513666 ABLIM1O14639 778 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 SOAT2O75908 522 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 PROZP22891 400 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 DGKEP52429 567 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 LMAN2Q12907 356 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 MYBPC2Q14324 1141 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 PROX2Q3B8N5 592 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 USP39Q53GS9 565 aaKnown RBP9.78□□□□□ -0.84
CAST-239ENST00000513666 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 USP37Q86T82 979 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 PDZD3Q86UT5 571 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 CMTM8Q8IZV2 173 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 EXOC4Q96A65 974 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 P2RY13Q9BPV8 354 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 SLC46A2Q9BY10 475 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 IL21Q9HBE4 155 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 POLD4Q9HCU8 107 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 TBX20Q9UMR3 447 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 INVSQ9Y283 1065 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 FREM2Q5SZK8 3169 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 DENND4CQ5VZ89 1909 aa9.78□□□□□ -0.84
CAST-239ENST00000513666 ZNF638Q14966 1978 aaKnown RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 SPAARA0A1B0GVQ0 90 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 UPK3BL1B0FP48 263 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 UPK3BL2E5RIL1 263 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 H0Y626 953 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 WNT7AO00755 349 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 TRIM16O95361 564 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 ARSAP15289 507 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 BCKDHBP21953 392 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 LRPAP1P30533 357 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 KRT2P35908 639 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 DHPSP49366 369 aaPredicted RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 AARSP49588 968 aaKnown RBP eCLIP9.77□□□□□ -0.84
CAST-239ENST00000513666 SIM1P81133 766 aaPredicted RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 C19orf48Q6RUI8 117 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 PIP4P1Q86T03 277 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 TSTD1Q8NFU3 115 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 PIGKQ92643 395 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 EZH1Q92800 747 aaPredicted RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 GCNAQ96QF7 691 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 LPIN3Q9BQK8 851 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 TARS2Q9BW92 718 aaKnown RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 MRPL4Q9BYD3 311 aaKnown RBP9.77□□□□□ -0.84
CAST-239ENST00000513666 TMEM134Q9H6X4 195 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 CCL26Q9Y258 94 aa9.77□□□□□ -0.84
CAST-239ENST00000513666 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.85
CAST-239ENST00000513666 LARGE1O95461 756 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 TYMPP19971 482 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 U2AF2P26368 475 aaKnown RBP eCLIP9.77□□□□□ -0.855e-13■■■□□ 18.9
CAST-239ENST00000513666 RPA1P27694 616 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 GJA4P35212 333 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 AVPR1AP37288 418 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 SCRN1Q12765 414 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 VEPH1Q14D04 833 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 PDGFRLQ15198 375 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 SLC10A6Q3KNW5 377 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 TRIM61Q5EBN2 209 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 NAIF1Q69YI7 327 aaPredicted RBP9.77□□□□□ -0.85
CAST-239ENST00000513666 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 MPZL3Q6UWV2 235 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 TAS1R3Q7RTX0 852 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 LAPTM4BQ86VI4 370 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 RASSF3Q86WH2 238 aa9.77□□□□□ -0.85
CAST-239ENST00000513666 TMEM130Q8N3G9 435 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms