RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	TSC2	P49815	1807 aa		13.53	□□□□□ -0.24
UBE2D3-231	ENST00000513098	CUTA	O60888	179 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ATF6	P18850	670 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CDC25C	P30307	473 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HOXD13	P35453	343 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SNRPF	P62306	86 aa	Known RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TFAM	Q00059	246 aa	Known RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SURF1	Q15526	300 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NFE2	Q16621	373 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ATL3	Q6DD88	541 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DPH6	Q7L8W6	267 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GPD1L	Q8N335	351 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PDILT	Q8N807	584 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	IQUB	Q8NA54	791 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SUMF1	Q8NBK3	374 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZBTB44	Q8NCP5	570 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZNF507	Q8TCN5	953 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LEO1	Q8WVC0	666 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RSPRY1	Q96DX4	576 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SAAL1	Q96ER3	474 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LRRC3B	Q96PB8	259 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	C7orf25	Q9BPX7	421 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TRIM9	Q9C026	710 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CHRD	Q9H2X0	955 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ATXN3L	Q9H3M9	355 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TASP1	Q9H6P5	420 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KIAA1586	Q9HCI6	787 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ABCB6	Q9NP58	842 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PRMT8	Q9NR22	394 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TFIP11	Q9UBB9	837 aa	Known RBP	13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098		R4GN57	208 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	COL4A3	Q01955	1670 aa		13.52	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TCHH	Q07283	1943 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PATJ	Q8NI35	1801 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	COL4A2	P08572	1712 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NCAN	O14594	1321 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GABRD	O14764	452 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	EIF3D	O15371	548 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LILRB5	O75023	590 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SOAT2	O75908	522 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PRPF6	O94906	941 aa	Known RBP	13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ITGB3	P05106	788 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HMGA1	P17096	107 aa	Known RBP	13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GABRR2	P28476	465 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	POLR2B	P30876	1174 aa	Known RBP	13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RBP5	P82980	135 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	EHHADH	Q08426	723 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	VEPH1	Q14D04	833 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MGAT5B	Q3V5L5	792 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ARHGAP29	Q52LW3	1261 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ARHGAP15	Q53QZ3	475 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SHC4	Q6S5L8	630 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PDCL2	Q8N4E4	241 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CSGALNACT2	Q8N6G5	542 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TOP6BL	Q8N6T0	577 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM3C	Q92520	227 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PKMYT1	Q99640	499 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SLITRK6	Q9H5Y7	841 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MAGEF1	Q9HAY2	307 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PDE11A	Q9HCR9	933 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZSCAN32	Q9NX65	697 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SIX4	Q9UIU6	781 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	AGAP1	Q9UPQ3	857 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PCDHB5	Q9Y5E4	795 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PIAS3	Q9Y6X2	628 aa		13.51	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MYBPHL	A2RUH7	354 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZNF233	A6NK53	670 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HUS1	O60921	280 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	F11	P03951	625 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CHRNB1	P11230	501 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DDX6	P26196	483 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LHX1	P48742	406 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PLCB2	Q00722	1185 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FOXK2	Q01167	660 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TSPY1	Q01534	308 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CSTF1	Q05048	431 aa	Known RBP	13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MTAP	Q13126	283 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DUOXA2	Q1HG44	320 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	STXBP5	Q5T5C0	1151 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GPR158	Q5T848	1215 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TMEM150A	Q86TG1	271 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	YAF2	Q8IY57	180 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KCNG4	Q8TDN1	519 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MYRFL	Q96LU7	910 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SEPT5	Q99719	369 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LPIN3	Q9BQK8	851 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SLC46A2	Q9BY10	475 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PCIF1	Q9H4Z3	704 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FOXD4L1	Q9NU39	408 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TMLHE	Q9NVH6	421 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	INTS13	Q9NVM9	706 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	L1RE1	Q9UN81	338 aa		13.5	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CACNA1A	O00555	2505 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DENND4C	Q5VZ89	1909 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CEP250	Q9BV73	2442 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GOLGA8IP	A6NC78	632 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GOLGA8J	A6NMD2	632 aa		13.49	□□□□□ -0.25

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