RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRIO-220ENST00000512979 CHST7Q9NS84 486 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 SIRPGQ9P1W8 387 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 CACNG4Q9UBN1 327 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 LRWD1Q9UFC0 647 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 DPP7Q9UHL4 492 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRIO-220ENST00000512979 PCDHB5Q9Y5E4 795 aa10.37□□□□□ -0.75
TRIO-220ENST00000512979 SF3B1O75533 1304 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIO-220ENST00000512979 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 RFPL2O75678 378 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 F13A1P00488 732 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 EDN1P05305 212 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 THP07101 528 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 SPATA31D3P0C874 917 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIO-220ENST00000512979 AVPR2P30518 371 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
TRIO-220ENST00000512979 TCF15Q12870 199 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 TUSC3Q13454 348 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 RAB33AQ14088 237 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 EEF1DP3Q658K8 133 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 SPATA31D4Q6ZUB0 917 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 HASPINQ8TF76 798 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 KIFAP3Q92845 792 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 PAAF1Q9BRP4 392 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 RAB34Q9BZG1 259 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 DDX19AQ9NUU7 478 aaKnown RBP10.36□□□□□ -0.75
TRIO-220ENST00000512979 DNAJB12Q9NXW2 375 aaKnown RBP10.36□□□□□ -0.75
TRIO-220ENST00000512979 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 PPT2Q9UMR5 302 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 GDAQ9Y2T3 454 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 PCDHB6Q9Y5E3 794 aa10.36□□□□□ -0.75
TRIO-220ENST00000512979 MYO10Q9HD67 2058 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PTGESO14684 152 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 TGM5O43548 720 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 RPL17P18621 184 aaKnown RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 EFNA5P52803 228 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 CTBSQ01459 385 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 CREMQ03060 361 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PPP2R3AQ06190 1150 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PDIA5Q14554 519 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 RABEP1Q15276 862 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 DCAF4L1Q3SXM0 396 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 RTP2Q5QGT7 225 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 ATF7IP2Q5U623 682 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 KRT79Q5XKE5 535 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 CEP135Q66GS9 1140 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 GPR65Q8IYL9 337 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 HDAC7Q8WUI4 952 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 SMG7Q92540 1137 aaKnown RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 STAMQ92783 540 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 SHDQ96IW2 340 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 RBSNQ9H1K0 784 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 MIR1-1HGQ9H1L0 117 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 CLEC4MQ9H2X3 399 aaPredicted RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 PLEKHA4Q9H4M7 779 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 PIDD1Q9HB75 910 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 FNIP2Q9P278 1114 aa10.35□□□□□ -0.75
TRIO-220ENST00000512979 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
TRIO-220ENST00000512979 CLUHO75153 1309 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 CCDC169A6NNP5 214 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 E9PMD0 336 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 K7ERI5 159 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 GFRA3O60609 400 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 N4BP1O75113 896 aaKnown RBP10.34□□□□□ -0.75
TRIO-220ENST00000512979 CDC25AP30304 524 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 PEX3P56589 373 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 TDGQ13569 410 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 IL17AQ16552 155 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 GLRA4Q5JXX5 417 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 NT5DC1Q5TFE4 455 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 FAM171A1Q5VUB5 890 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 MCTP1Q6DN14 999 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 CYP26C1Q6V0L0 522 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 APBB1IPQ7Z5R6 666 aaPredicted RBP10.34□□□□□ -0.75
TRIO-220ENST00000512979 CEP57Q86XR8 500 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 GATAD2BQ8WXI9 593 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 ZNF707Q96C28 371 aaPredicted RBP10.34□□□□□ -0.75
TRIO-220ENST00000512979 TTPALQ9BTX7 342 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 RUSC1Q9BVN2 902 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 RHOBTB2Q9BYZ6 727 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 NT5C3AQ9H0P0 336 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 MFSD1Q9H3U5 465 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 KCNK12Q9HB15 430 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 DNM3Q9UQ16 869 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 R3HCC1Q9Y3T6 440 aaKnown RBP10.34□□□□□ -0.75
TRIO-220ENST00000512979 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
TRIO-220ENST00000512979 TRIOO75962 3097 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 LAD1O00515 517 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 SMAD7O15105 426 aaKnown RBP10.33□□□□□ -0.76
TRIO-220ENST00000512979 HIP1RO75146 1068 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms