RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.09□□□□□ -1.59
HTT-210ENST00000512909 AFF4Q9UHB7 1163 aaKnown RBP5.09□□□□□ -1.59
HTT-210ENST00000512909 ST6GALNAC2Q9UJ37 374 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 USP15Q9Y4E8 981 aaPredicted RBP5.09□□□□□ -1.59
HTT-210ENST00000512909 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 PREX1Q8TCU6 1659 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 UGGT1Q9NYU2 1555 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 PZPP20742 1482 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 NPHP4O75161 1426 aaPredicted RBP5.08□□□□□ -1.6
HTT-210ENST00000512909 ERBINQ96RT1 1412 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 ADAMTS20P59510 1910 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 POLRMTO00411 1230 aaKnown RBP5.08□□□□□ -1.6
HTT-210ENST00000512909 TOR1BO14657 336 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 RASSF9O75901 435 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 GPANK1O95872 356 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 HDCP19113 662 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 SLC6A2P23975 617 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 BTKQ06187 659 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 DUSP8Q13202 625 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 USP37Q86T82 979 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 SRLQ86TD4 932 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 SYNE4Q8N205 404 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 P2RX7Q99572 595 aaKnown RBP5.08□□□□□ -1.6
HTT-210ENST00000512909 C22orf23Q9BZE7 217 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 ARFGAP3Q9NP61 516 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 SMPD4Q9NXE4 827 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 ITGB1BP2Q9UKP3 347 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 HDAC9Q9UKV0 1011 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 PHTF1Q9UMS5 762 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 NEU2Q9Y3R4 380 aa5.08□□□□□ -1.6
HTT-210ENST00000512909 DISP3Q9P2K9 1392 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 PATE3B3GLJ2 98 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 BTN3A1O00481 513 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 TRIM24O15164 1050 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 PPFIA4O75335 1185 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 VPS4BO75351 444 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 RPS6KA4O75676 772 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 UNC5CO95185 931 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 PARP1P09874 1014 aaKnown RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 APOBEC3AP31941 199 aaPredicted RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 HSPA1LP34931 641 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 ICAM4Q14773 271 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 NRN1LQ496H8 165 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 EMC10Q5UCC4 262 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 SLC30A10Q6XR72 485 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 GPRIN1Q7Z2K8 1008 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 DPP9Q86TI2 863 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 MYLK4Q86YV6 388 aaPredicted RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 SDR16C5Q8N3Y7 309 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 CCDC150Q8NCX0 1101 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 FAM46DQ8NEK8 389 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 PHKBQ93100 1093 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 RNF31Q96EP0 1072 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 MED15Q96RN5 788 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 STK31Q9BXU1 1019 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 CPEB1Q9BZB8 566 aaKnown RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 UNKQ9C0B0 810 aaKnown RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 ZNF518BQ9C0D4 1074 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 FAM30AQ9NZY2 134 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 CNOT11Q9UKZ1 510 aaKnown RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 SETD1BQ9UPS6 1966 aaKnown RBP5.07□□□□□ -1.6
HTT-210ENST00000512909 PLXNC1O60486 1568 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 ABCC3O15438 1527 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 NLRP1Q9C000 1473 aa5.07□□□□□ -1.6
HTT-210ENST00000512909 PNPLA7Q6ZV29 1317 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 RNASET2O00584 256 aaKnown RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 KPNA5O15131 536 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 SOAT2O75908 522 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 IL18RAPO95256 599 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 MATN4O95460 622 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 NPR1P16066 1061 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 EN2P19622 333 aaPredicted RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 ITGALP20701 1170 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 STT3AP46977 705 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 ARFIP2P53365 341 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 JAG1P78504 1218 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 KRT17Q04695 432 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 FPGSQ05932 587 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 RRP1BQ14684 758 aaKnown RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 GORABQ5T7V8 394 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 FAM160B1Q5W0V3 765 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 C1orf228Q6PIY5 440 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 MAMDC4Q6UXC1 1216 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 Q6ZRM9 215 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 GDF7Q7Z4P5 450 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 RHOT2Q8IXI1 618 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 PALM2Q8IXS6 379 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 KRT78Q8N1N4 520 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 OR56A1Q8NGH5 318 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 CXorf38Q8TB03 319 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 MORC4Q8TE76 937 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 EDAQ92838 391 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 MARS2Q96GW9 593 aaKnown RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 TRIB1Q96RU8 372 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 STRBPQ96SI9 672 aaKnown RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 SELENOOQ9BVL4 669 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms