RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TMCO5AQ8N6Q1 288 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 ZNF263O14978 683 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 CYBBP04839 570 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 PTGER2P43116 358 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 DAB2P98082 770 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 SNX17Q15036 470 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 PRPF39Q86UA1 669 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 FAM71DQ8N9W8 422 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 MYCBPAPQ8TBZ2 947 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 PPP1R36Q96LQ0 422 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 KLF6Q99612 283 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 ADNPQ9H2P0 1102 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 METTL5Q9NRN9 209 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 FOXN3O00409 490 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 MTFR1Q15390 333 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 LRRC6Q86X45 466 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 LRRC34Q8IZ02 419 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 KIAA1257Q9ULG3 409 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TRIM49D1C9J1S8 452 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 GRAP2O75791 330 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 VHLP40337 213 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TOB1P50616 345 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TAGAPQ8N103 731 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TMBIM4Q9HC24 238 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 RIC8BQ9NVN3 520 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 SEC24DO94855 1032 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 ACADSP16219 412 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 MYBPC2Q14324 1141 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 GOLGA7BQ2TAP0 167 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 SLC30A9Q6PML9 568 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 RNF181Q9P0P0 153 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 TBC1D4O60343 1298 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 RGS4P49798 205 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 APLFQ8IW19 511 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 LSM7Q9UK45 103 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 IQCA1LA6NCM1 817 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 BRD2P25440 801 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 HSPA13P48723 471 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 IRX1P78414 480 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 CACNB2Q08289 660 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 DNAJC3Q13217 504 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 LRRC36Q1X8D7 754 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 SMTNL2Q2TAL5 461 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 DCAF6Q58WW2 860 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 EFCAB12Q6NXP0 572 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 ZNF669Q96BR6 464 aaPredicted RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 MAGEB18Q96M61 343 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 DYRK4Q9NR20 520 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 ICAM1P05362 532 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 GARTP22102 1010 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 CHRNA5P30532 468 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 KBTBD12Q3ZCT8 623 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 FBXL16Q8N461 479 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 MDM1Q8TC05 714 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 TFB1MQ8WVM0 346 aaKnown RBP13□□□□□ -0.33
COL11A1-210ENST00000512756 ELP3Q9H9T3 547 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 SUFUQ9UMX1 484 aa13□□□□□ -0.33
COL11A1-210ENST00000512756 RRN3P2A6NIE6 340 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 ZSCAN9O15535 394 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-210ENST00000512756 ANXA9O76027 345 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 COPAP53621 1224 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 MCL1Q07820 350 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL11A1-210ENST00000512756 FAM32AQ9Y421 112 aaKnown RBP12.99□□□□□ -0.33
COL11A1-210ENST00000512756 CPS1P31327 1500 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 O00370 1275 aa12.99□□□□□ -0.33
COL11A1-210ENST00000512756 GLRA3O75311 464 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms