RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 RABGGTAQ92696 567 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 SPATA25Q9BR10 227 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 CPEB1Q9BZB8 566 aaKnown RBP8.47□□□□□ -1.05
RFC1-214ENST00000512726 PCDHAC1Q9H158 963 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 GGA3Q9NZ52 723 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 NTMQ9P121 344 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 ADAM29Q9UKF5 820 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 ZMYND8Q9ULU4 1186 aaPredicted RBP8.47□□□□□ -1.05
RFC1-214ENST00000512726 CAPN11Q9UMQ6 739 aa8.47□□□□□ -1.05
RFC1-214ENST00000512726 CCP110O43303 1012 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 NPPBP16860 134 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 TPH1P17752 444 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 VIPR2P41587 438 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 CPT1AP50416 773 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 UBXN2BQ14CS0 331 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 TBR1Q16650 682 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 FAM110CQ1W6H9 321 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.46□□□□□ -1.06
RFC1-214ENST00000512726 FAM180BQ6P0A1 224 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 KIAA0408Q6ZU52 694 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 C2CD5Q86YS7 1000 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 SLC17A8Q8NDX2 589 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 FAM46DQ8NEK8 389 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 DNERQ8NFT8 737 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 FAM168AQ92567 244 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 HDAC2Q92769 488 aaKnown RBP8.46□□□□□ -1.06
RFC1-214ENST00000512726 UBN1Q9NPG3 1134 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 XPNPEP3Q9NQH7 507 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 AGAP1Q9UPQ3 857 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
RFC1-214ENST00000512726 ZDHHC9Q9Y397 364 aa8.46□□□□□ -1.06
RFC1-214ENST00000512726 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
RFC1-214ENST00000512726 HMX3A6NHT5 357 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 FCHO1O14526 889 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 FAM155BO75949 473 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 AGFG2O95081 481 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 GLP2RO95838 553 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 CST5P28325 142 aaPredicted RBP8.45□□□□□ -1.06
RFC1-214ENST00000512726 ADD2P35612 726 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 NFYCQ13952 458 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 LRP8Q14114 963 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 PDE1CQ14123 709 aaPredicted RBP8.45□□□□□ -1.06
RFC1-214ENST00000512726 KCTD2Q14681 263 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 PLAG1Q6DJT9 500 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 MZT2BQ6NZ67 158 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 ZDHHC24Q6UX98 284 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 KRBA2Q6ZNG9 492 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 FITM2Q8N6M3 262 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 NEUROD6Q96NK8 337 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 SEPSECSQ9HD40 501 aaKnown RBP8.45□□□□□ -1.06
RFC1-214ENST00000512726 FBXO34Q9NWN3 711 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 FAM53CQ9NYF3 392 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 CA14Q9ULX7 337 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 NR2E1Q9Y466 385 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 RPS6KL1Q9Y6S9 549 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 PNPLA7Q6ZV29 1317 aa8.45□□□□□ -1.06
RFC1-214ENST00000512726 HOXC11O43248 304 aaPredicted RBP8.44□□□□□ -1.06
RFC1-214ENST00000512726 HOXA3O43365 443 aaPredicted RBP8.44□□□□□ -1.06
RFC1-214ENST00000512726 SOAT2O75908 522 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 ACTL6BO94805 426 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 CD4P01730 458 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 TLE2Q04725 743 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 TRIM71Q2Q1W2 868 aaKnown RBP8.44□□□□□ -1.06
RFC1-214ENST00000512726 TMTC4Q5T4D3 741 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 FAXCQ5TGI0 409 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 VPS53Q5VIR6 699 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 MRNIPQ6NTE8 343 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 PRR23BQ6ZRT6 265 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 RALYLQ86SE5 291 aaKnown RBP8.44□□□□□ -1.06
RFC1-214ENST00000512726 ADGRE4PQ86SQ3 457 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 GAS2L3Q86XJ1 694 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 CCDC89Q8N998 374 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 SIMC1Q8NDZ2 872 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 TMIEQ8NEW7 156 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 NELL2Q99435 816 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 IMPG2Q9BZV3 1241 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 MLXIPQ9HAP2 919 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 GCM1Q9NP62 436 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 BCCIPQ9P287 314 aaKnown RBP eCLIP8.44□□□□□ -1.06
RFC1-214ENST00000512726 HS3ST4Q9Y661 456 aa8.44□□□□□ -1.06
RFC1-214ENST00000512726 UBE2QL1A1L167 161 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 DYTNA2CJ06 578 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 PMS2P1A4D2B8 440 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 CDHR4A6H8M9 788 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 AQP7P3A6NL99 342 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 TBKBP1A7MCY6 615 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 H7C4K7 107 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 COQ9O75208 318 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 KIF20AO95235 890 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 IFIT1P09914 478 aaKnown RBP8.43□□□□□ -1.06
RFC1-214ENST00000512726 CKBP12277 381 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 AP2B1P63010 937 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 SATB1Q01826 763 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
RFC1-214ENST00000512726 TCF15Q12870 199 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 BMT2Q1RMZ1 405 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 SLC5A9Q2M3M2 681 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 PLA1AQ53H76 456 aa8.43□□□□□ -1.06
RFC1-214ENST00000512726 ATXN7L2Q5T6C5 722 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms