RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 IFT52Q9Y366 437 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
GYPA-208ENST00000512064 MTF2Q9Y483 593 aaPredicted RBP4.29□□□□□ -1.72
GYPA-208ENST00000512064 IPPQ9Y573 584 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 MAPKBP1O60336 1514 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 ABCA10Q8WWZ4 1543 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 ATAD2BQ9ULI0 1458 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 FHOD3Q2V2M9 1422 aa4.29□□□□□ -1.72
GYPA-208ENST00000512064 ABCC11Q96J66 1382 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 A0A088AWK7 358 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 A0A0G2JPF8 293 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 C1orf232A0A0U1RR37 186 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 C17orf113A0A1B0GUU1 675 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CTAGE15A4D2H0 777 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 GOLGA8JA6NMD2 632 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 OR5K4A6NMS3 321 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 HNRNPCL3B7ZW38 293 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 C9IYK1 514 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 RASA4BC9J798 803 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PFDN6O15212 129 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ALOX15BO15296 676 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 POLR2DO15514 142 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 ARHGAP6O43182 974 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZBTB43O43298 467 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 STX6O43752 255 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZNF862O60290 1169 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 STX10O60499 249 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 HSF2BPO75031 334 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CNOT3O75175 753 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 SERPINI2O75830 405 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SNX4O95219 450 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ASMTLO95671 621 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 APBB3O95704 486 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 DDX58O95786 925 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 CRYZL1O95825 349 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZBED1O96006 694 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PRLP01236 227 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CHRNA1P02708 482 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 HRGP04196 525 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CYP17A1P05093 508 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 IFIT2P09913 472 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 CTAGE8P0CG41 777 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 HNRNPCL4P0DMR1 293 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PCNAP12004 261 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 GFAPP14136 432 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PRKACAP17612 351 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 MUTP22033 750 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 MAOBP27338 520 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 RXRBP28702 533 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SERPINB3P29508 390 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CASP14P31944 242 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 IFNA8P32881 189 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CHKAP35790 457 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PDE6CP51160 858 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZNF143P52747 638 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 BPIFB4P59827 614 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 EIF4A1P60842 406 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 RAB4BP61018 213 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 STX1BP61266 288 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ATP6V0D1P61421 351 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 GNGT1P63211 74 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ELF3P78545 371 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 ECT2LQ008S8 904 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PFKPQ01813 784 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 NRG1Q02297 640 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 CDK18Q07002 472 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 DHX34Q14147 1143 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 MORC3Q14149 939 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ITIH4Q14624 930 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 MBTPS1Q14703 1052 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ASIC2Q16515 512 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 LEXMQ3ZCV2 418 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 C5orf22Q49AR2 442 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TTMPQ5BVD1 217 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ANKRD20A2Q5SQ80 823 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 C6orf10Q5SRN2 563 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ANKRD20A1Q5TYW2 823 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SYDE2Q5VT97 1194 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ANKRD20A3Q5VUR7 823 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 OR7E24Q6IFN5 339 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TMEM154Q6P9G4 183 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 LRFN4Q6PJG9 635 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 KSR2Q6VAB6 950 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 C16orf86Q6ZW13 317 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 EEPD1Q7L9B9 569 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 NLRC3Q7RTR2 1065 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ATG9AQ7Z3C6 839 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 UBE3BQ7Z3V4 1068 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PATL1Q86TB9 770 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 CTAGE6Q86UF2 777 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 EXOC3L1Q86VI1 746 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 COMTD1Q86VU5 262 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CTAGE4Q8IX94 777 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SLFN12Q8IYM2 578 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms