RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 TRIP12Q14669 1992 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-228ENST00000511676 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 CTSHP09668 335 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 CYP11B1P15538 503 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 TERF1P54274 439 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 ARID5AQ03989 594 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 SMAD4Q13485 552 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 STILQ15468 1287 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 SMAD2Q15796 467 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 SV2CQ496J9 727 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 BMP8AQ7Z5Y6 402 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 NPAS4Q8IUM7 802 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 DDX1Q92499 740 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 SECISBP2LQ93073 1101 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 TATDN2Q93075 761 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 VCPIP1Q96JH7 1222 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 UROC1Q96N76 676 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 PI4K2AQ9BTU6 479 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 PCDHB7Q9Y5E2 793 aa9.71□□□□□ -0.86
NR1I3-228ENST00000511676 SPTBN5Q9NRC6 3674 aaKnown RBP9.71□□□□□ -0.86
NR1I3-228ENST00000511676 TANC1Q9C0D5 1861 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 LCHNA4D1U4 455 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 EPOPA6NHQ4 379 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 PIRO00625 290 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 CYP26A1O43174 497 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 MED7O43513 233 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 RTN2O75298 545 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 TACC1O75410 805 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 MYBL1P10243 752 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 GHRP10912 638 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 KRT5P13647 590 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 CD52P31358 61 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 NDUFV1P49821 464 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 PTPN5P54829 565 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 TNNC1P63316 161 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 FAM189BP81408 668 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 KRT17Q04695 432 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 GFPT1Q06210 699 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 GRIK3Q13003 919 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 GPNMBQ14956 572 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 COL19A1Q14993 1142 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 WDR72Q3MJ13 1102 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 DNTTIP2Q5QJE6 756 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 C9orf57Q5W0N0 161 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 SLC24A5Q71RS6 500 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 ZNF598Q86UK7 904 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 UNC93AQ86WB7 457 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 GLYCTKQ8IVS8 523 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 C17orf53Q8N3J3 647 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 RBBP8NLQ8NC74 664 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 CTNNBL1Q8WYA6 563 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 RFFLQ8WZ73 363 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 KAT5Q92993 513 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 ZMAT2Q96NC0 199 aaKnown RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 NECAB3Q96P71 396 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 NOX5Q96PH1 765 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 ALS2CR12Q96Q35 445 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 RPS6KC1Q96S38 1066 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 C17orf80Q9BSJ5 609 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
NR1I3-228ENST00000511676 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 CD207Q9UJ71 328 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 AGAP1Q9UPQ3 857 aa9.7□□□□□ -0.86
NR1I3-228ENST00000511676 NCANO14594 1321 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms