RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KIF4AO95239 1232 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 CTAGE8P0CG41 777 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 HSPA8P11142 646 aaKnown RBP16.14■□□□□ 0.17
SCLT1-209ENST00000511426 SCNN1GP51170 649 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 PTP4A2Q12974 167 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 CTAGE6Q86UF2 777 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 CTAGE4Q8IX94 777 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 URGCPQ8TCY9 931 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 HES6Q96HZ4 224 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 HEXIM2Q96MH2 286 aaKnown RBP16.14■□□□□ 0.17
SCLT1-209ENST00000511426 COG5Q9UP83 839 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 HOXA2O43364 376 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 TADA3O75528 432 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 FTCDO95954 541 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
SCLT1-209ENST00000511426 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 GJA8P48165 433 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 LHX1P48742 406 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 UPP1Q16831 310 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 CFAP221Q4G0U5 840 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 ERICH1Q86X53 443 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 ADGRF2Q8IZF7 708 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 OR6B3Q8NGW1 331 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 STK32AQ8WU08 396 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 TWNKQ96RR1 684 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 OSBPL7Q9BZF2 842 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 SNX25Q9H3E2 840 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 CYLDQ9NQC7 956 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 DSEQ9UL01 958 aa16.13■□□□□ 0.17
SCLT1-209ENST00000511426 MEIS3P2A8K0S8 358 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 A8MXQ7 604 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 MYO1FO00160 1098 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 CXCL10P02778 98 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 RRM1P23921 792 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 MAN1A1P33908 653 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 GABRB2P47870 512 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-209ENST00000511426 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 PASD1Q8IV76 773 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 C3orf20Q8ND61 904 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 C1orf131Q8NDD1 294 aaKnown RBP16.12■□□□□ 0.17
SCLT1-209ENST00000511426 KBTBD7Q8WVZ9 684 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 UBXN4Q92575 508 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 LPPQ93052 612 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 MRPL45Q9BRJ2 306 aaKnown RBP16.12■□□□□ 0.17
SCLT1-209ENST00000511426 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 WNT8AQ9H1J5 351 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 CARD9Q9H257 536 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 GOLGA2P5Q9HBQ8 144 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 HESX1Q9UBX0 185 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 L1RE1Q9UN81 338 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 ALG6Q9Y672 507 aa16.12■□□□□ 0.17
SCLT1-209ENST00000511426 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TMEM189-UBE2V1I3L0A0 370 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 GABRDO14764 452 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 SPTLC1O15269 473 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 PQBP1O60828 265 aaKnown RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 MICAL2O94851 1124 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TUBBP07437 444 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 RFC2P35250 354 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 GNL1P36915 607 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 CCDC181Q5TID7 509 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 CREG2Q8IUH2 290 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 UBL4BQ8N7F7 174 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 IPO4Q8TEX9 1081 aaKnown RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TRIP11Q15643 1979 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TANC1Q9C0D5 1861 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 M0QYV0 167 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 CYB561D2O14569 222 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 NBNO60934 754 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 CFHP08603 1231 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 GPD2P43304 727 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 CTCFP49711 727 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 MAMLD1Q13495 774 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 ZNF268Q14587 947 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 MMS22LQ6ZRQ5 1243 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 RTN4RL1Q86UN2 441 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 ZDHHC17Q8IUH5 632 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 PDCL2Q8N4E4 241 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 WDTC1Q8N5D0 677 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 FNIP1Q8TF40 1166 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 LINC01599Q8WXQ3 324 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 C18orf8Q96DM3 657 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 PLVAPQ9BX97 442 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 MIOSQ9NXC5 875 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 ANAPC7Q9UJX3 599 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TSPAN16Q9UKR8 245 aa16.11■□□□□ 0.17
SCLT1-209ENST00000511426 TTC7AQ9ULT0 858 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-209ENST00000511426 HTTP42858 3142 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 CALCAP01258 141 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 CYP11A1P05108 521 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 ODC1P11926 461 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 CTNNA2P26232 953 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms