RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 TXNDC11Q6PKC3 985 aa9□□□□□ -0.97
TRIO-217ENST00000511019 CEP68Q76N32 757 aa9□□□□□ -0.97
TRIO-217ENST00000511019 DYMQ7RTS9 669 aa9□□□□□ -0.97
TRIO-217ENST00000511019 BRAPQ7Z569 592 aa9□□□□□ -0.97
TRIO-217ENST00000511019 LRRTM3Q86VH5 581 aa9□□□□□ -0.97
TRIO-217ENST00000511019 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
TRIO-217ENST00000511019 LRRC15Q8TF66 581 aa9□□□□□ -0.97
TRIO-217ENST00000511019 POMGNT1Q8WZA1 660 aa9□□□□□ -0.97
TRIO-217ENST00000511019 LARP4BQ92615 738 aaKnown RBP9□□□□□ -0.97
TRIO-217ENST00000511019 FIZ1Q96SL8 496 aa9□□□□□ -0.97
TRIO-217ENST00000511019 CCSER1Q9C0I3 900 aa9□□□□□ -0.97
TRIO-217ENST00000511019 ST6GALNAC4Q9H4F1 302 aa9□□□□□ -0.97
TRIO-217ENST00000511019 UPF2Q9HAU5 1272 aaKnown RBP9□□□□□ -0.97
TRIO-217ENST00000511019 IL21Q9HBE4 155 aa9□□□□□ -0.97
TRIO-217ENST00000511019 SEMA4GQ9NTN9 838 aa9□□□□□ -0.97
TRIO-217ENST00000511019 CCDC39Q9UFE4 941 aa9□□□□□ -0.97
TRIO-217ENST00000511019 EXOC7Q9UPT5 735 aa9□□□□□ -0.97
TRIO-217ENST00000511019 PCDHB5Q9Y5E4 795 aa9□□□□□ -0.97
TRIO-217ENST00000511019 MIA3Q5JRA6 1907 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 FAM186AA6NE01 2351 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 SOBPA7XYQ1 873 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 TISP43B9A030 160 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 ATG13O75143 517 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 PRPF40AO75400 957 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 IL18RAPO95256 599 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 LDHAP00338 332 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 F11P03951 625 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 ATF6P18850 670 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 HOXA6P31267 233 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 AVPR1AP37288 418 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 PNPLA4P41247 253 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 GRSF1Q12849 480 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRIO-217ENST00000511019 BFSP1Q12934 665 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 SRSF5Q13243 272 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 RUNX3Q13761 415 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 CC2D1AQ6P1N0 951 aaPredicted RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 CRELD2Q6UXH1 353 aaPredicted RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 Q6ZS52 159 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 CMTM8Q8IZV2 173 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 NETO1Q8TDF5 533 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 CACTINQ8WUQ7 758 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 HVCN1Q96D96 273 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 EPSTI1Q96J88 318 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 FAM213AQ9BRX8 229 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 SMG9Q9H0W8 520 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 MRPL44Q9H9J2 332 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 TDP1Q9NUW8 608 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 ABI2Q9NYB9 513 aaPredicted RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 AGAP1Q9UPQ3 857 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.99□□□□□ -0.97
TRIO-217ENST00000511019 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 CACNA1IQ9P0X4 2223 aa8.99□□□□□ -0.97
TRIO-217ENST00000511019 SLC30A4O14863 429 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 AXIN1O15169 862 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 HUS1O60921 280 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 PRAMEF12O95522 483 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 CSH1P0DML2 217 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 CSH2P0DML3 217 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 HMGA1P17096 107 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 DDX6P26196 483 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRIO-217ENST00000511019 NLRP12P59046 1061 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 RPL10AP62906 217 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 TFAMQ00059 246 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 TSPY1Q01534 308 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 CCINQ13939 588 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 NFE2Q16621 373 aaPredicted RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 WDR44Q5JSH3 913 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 RRAGBQ5VZM2 374 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 SV2BQ7L1I2 683 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 MON1AQ86VX9 555 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 WDR5BQ86VZ2 330 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 SFR1Q86XK3 245 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 SYCP3Q8IZU3 236 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 MRPS31Q92665 395 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 EXOC4Q96A65 974 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 ZNF560Q96MR9 790 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 CNTNAP3BQ96NU0 1288 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 ACCSQ96QU6 501 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 FAM83CQ9BQN1 747 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 ACBD6Q9BR61 282 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 CNTNAP3Q9BZ76 1288 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 IKZF4Q9H2S9 585 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 SEL1LQ9UBV2 794 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 MAGED2Q9UNF1 606 aaPredicted RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 SLC8A2Q9UPR5 921 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 R3HCC1Q9Y3T6 440 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 PCDHB13Q9Y5F0 798 aa8.98□□□□□ -0.97
TRIO-217ENST00000511019 RIF1Q5UIP0 2472 aaKnown RBP8.98□□□□□ -0.97
TRIO-217ENST00000511019 FANCMQ8IYD8 2048 aa8.97□□□□□ -0.97
TRIO-217ENST00000511019 PATJQ8NI35 1801 aa8.97□□□□□ -0.97
TRIO-217ENST00000511019 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
TRIO-217ENST00000511019 TRDMT1O14717 391 aaKnown RBP8.97□□□□□ -0.97
TRIO-217ENST00000511019 EXTL3O43909 919 aa8.97□□□□□ -0.97
TRIO-217ENST00000511019 GCNT3O95395 438 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms