RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SPACA7Q96KW9 195 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 CCDC42Q96M95 316 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
LIN54-210ENST00000510877 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 IFI16Q16666 785 aaKnown RBP13.2□□□□□ -0.3
LIN54-210ENST00000510877 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 ATAD1Q8NBU5 361 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
LIN54-210ENST00000510877 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 VPS18Q9P253 973 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 HDXQ7Z353 690 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 RGS20O76081 388 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 BDNFP23560 247 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 GNG11P61952 73 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 COG7P83436 770 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 BYSLQ13895 437 aaKnown RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 HADHQ16836 314 aaKnown RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 TRAPPC11Q7Z392 1133 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 RNF168Q8IYW5 571 aaPredicted RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 FAM122AQ96E09 287 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 SLC12A8A0AV02 714 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 H3BNC9 293 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 EFEMP1Q12805 493 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 SEPT7Q16181 437 aaKnown RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 ARFGAP2Q8N6H7 521 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 NELL2Q99435 816 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 ADAM7Q9H2U9 754 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 MTMR10Q9NXD2 777 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 H0Y626 953 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 ADH1CP00326 375 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 APODP05090 189 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 CLCNKBP51801 687 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 MORC3Q14149 939 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 CEP120Q8N960 986 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 SUSD6Q92537 303 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 NAA15Q9BXJ9 866 aaKnown RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
LIN54-210ENST00000510877 KRT82Q9NSB4 513 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 MYO1AQ9UBC5 1043 aa13.19□□□□□ -0.3
LIN54-210ENST00000510877 MAN2B1O00754 1011 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 STK10O94804 968 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
LIN54-210ENST00000510877 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 UBE4BO95155 1302 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 MEI4A8MW99 385 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 SPOPO43791 374 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 ATICP31939 592 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 NME3Q13232 169 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 ZNF720Q7Z2F6 126 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 QSER1Q2KHR3 1735 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CASP1P29466 404 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 ZNF449Q6P9G9 518 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 WDR49Q8IV35 697 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 CTTNBP2NLQ9P2B4 639 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 C9IYK1 514 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CTSAP10619 480 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 DGKEP52429 567 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CACUL1Q86Y37 369 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 MED15Q96RN5 788 aa13.18□□□□□ -0.3
LIN54-210ENST00000510877 AFF4Q9UHB7 1163 aaKnown RBP13.18□□□□□ -0.3
LIN54-210ENST00000510877 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 HAS3O00219 553 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 HSF2BPO75031 334 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 BRD1O95696 1058 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 ARL4AP40617 200 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 RGS7P49802 495 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms