RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TRIM42Q8IWZ5 723 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 NME8Q8N427 588 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 SPATA18Q8TC71 538 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 PPP1R36Q96LQ0 422 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 SLC12A4Q9UP95 1085 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 F8VP50 259 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 CYP1A2P05177 515 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 PTPN4P29074 926 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 CUL2Q13617 745 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 TNFAIP1Q13829 316 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 SNRNP48Q6IEG0 339 aaKnown RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 CCNYQ8ND76 341 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 TMEM120AQ9BXJ8 343 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 DCLRE1BQ9H816 532 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 WRAP73Q9P2S5 460 aaPredicted RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 LRP6O75581 1613 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 LOC100653049A0A140TA62 436 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 KRT34O76011 436 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 SFNP31947 248 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 RABGAP1LQ5R372 815 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 TTC13Q8NBP0 860 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 MTBPQ96DY7 904 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 DNALI1O14645 258 aaPredicted RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 FOXN2P32314 431 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 ATXN3P54252 364 aaPredicted RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 ROR1Q01973 937 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 KPNB1Q14974 876 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 WLSQ5T9L3 541 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 ISLR2Q6UXK2 745 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 FAM228AQ86W67 206 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 WDR75Q8IWA0 830 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 LENG9Q96B70 501 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 ANKRD36BP1Q96IX9 119 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 KCNN4O15554 427 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PSTPIP1O43586 416 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 KRT7P08729 469 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 ITGB5P18084 799 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PTDSS1P48651 473 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 BMPR2Q13873 1038 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 ATP9AO75110 1047 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PYGBP11216 843 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 DPEP1P16444 411 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 CHRNB2P17787 502 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PEX5P50542 639 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 RPL7AP62424 266 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 COG7P83436 770 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PRKCEQ02156 737 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 MROH9Q5TGP6 573 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 SPOCD1Q6ZMY3 1216 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 RASSF3Q86WH2 238 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 FAM13CQ8NE31 585 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 P2RX7Q99572 595 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 VPS11Q9H270 941 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 KCNG1Q9UIX4 513 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 FIS1Q9Y3D6 152 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 EFTUD2Q15029 972 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP38-202ENST00000510377 WDR72Q3MJ13 1102 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 ZNF667Q5HYK9 610 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 MFSD5Q6N075 450 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 PRPF39Q86UA1 669 aaKnown RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 GMCL1P1Q8NEA9 526 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 EXD1Q8NHP7 514 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 FAM149B1Q96BN6 582 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 FBXO6Q9NRD1 293 aaPredicted RBP15.62■□□□□ 0.09
USP38-202ENST00000510377 NRBP2Q9NSY0 501 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 CYP39A1Q9NYL5 469 aa15.62■□□□□ 0.09
USP38-202ENST00000510377 C2orf71A6NGG8 1288 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 M0QYV0 167 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 KRT36O76013 467 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 KRT38O76015 456 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 AP2B1P63010 937 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 MAP7Q14244 749 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 ZNF268Q14587 947 aaPredicted RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 CHI3L2Q15782 390 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 PAPOLBQ9NRJ5 636 aaKnown RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 ZC3H7BQ9UGR2 993 aaKnown RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 NR3C2P08235 984 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 SLC1A5Q15758 541 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 PPIL6Q8IXY8 311 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 GLIS2Q9BZE0 524 aaPredicted RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 FOXP3Q9BZS1 431 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 APOBEC2Q9Y235 224 aaKnown RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 EDIL3O43854 480 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 DGAT1O75907 488 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 BCAR1P56945 870 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 TJP1Q07157 1748 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 MAP7D1Q3KQU3 841 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 ST13P4Q8IZP2 240 aaPredicted RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 SCYL1Q96KG9 808 aa15.61■□□□□ 0.09
USP38-202ENST00000510377 DDX56Q9NY93 547 aaKnown RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 PARP4Q9UKK3 1724 aaKnown RBP15.61■□□□□ 0.09
USP38-202ENST00000510377 A6NJR5 290 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms