RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ZNF33AQ06730 810 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 BFSP1Q12934 665 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 SMAD1Q15797 465 aaKnown RBP11.82□□□□□ -0.52
SNF8-207ENST00000509995 FAM187BQ17R55 369 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 PLEKHG6Q3KR16 790 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 COLEC12Q5KU26 742 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 DEFB119Q8N690 84 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 SETD7Q8WTS6 366 aaKnown RBP11.82□□□□□ -0.52
SNF8-207ENST00000509995 DDX12PQ92771 950 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
SNF8-207ENST00000509995 GCNAQ96QF7 691 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 ARID3AQ99856 593 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 KIF9Q9HAQ2 790 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 ZMYM5Q9UJ78 669 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 NUB1Q9Y5A7 615 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 AHCTF1Q8WYP5 2266 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 ANK1P16157 1881 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 CYP3A7-CYP3A51PA0A087WV96 503 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 SMIM28A0A1B0GU29 152 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 LRRIQ4A6NIV6 560 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 PLK4O00444 970 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 ZBTB39O15060 712 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 OR4Q2P0C623 313 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 CYP3A7P24462 503 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 IL12RB1P42701 662 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 CXADRP78310 365 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 GRIK2Q13002 908 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 TMEM132AQ24JP5 1023 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
SNF8-207ENST00000509995 TTC9BQ8N6N2 239 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 TBCKQ8TEA7 893 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 HMGB4Q8WW32 186 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 BAP1Q92560 729 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 PNMA5Q96PV4 448 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 POLR3FQ9H1D9 316 aaPredicted RBP11.81□□□□□ -0.52
SNF8-207ENST00000509995 FZD8Q9H461 694 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
SNF8-207ENST00000509995 FAM205CA6NFA0 338 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 ZBTB43O43298 467 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 DGAT1O75907 488 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SOAT2O75908 522 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 MCM4P33991 863 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SEMG2Q02383 582 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 PRPF4BQ13523 1007 aaKnown RBP11.8□□□□□ -0.52
SNF8-207ENST00000509995 DCAF4L1Q3SXM0 396 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 CENPPQ6IPU0 288 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SLC36A4Q6YBV0 504 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SLC41A1Q8IVJ1 513 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 ALLCQ8N6M5 410 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SNIP1Q8TAD8 396 aaKnown RBP11.8□□□□□ -0.52
SNF8-207ENST00000509995 ATP2A3Q93084 1043 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 HSPA12BQ96MM6 686 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 CDC6Q99741 560 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 ZDHHC5Q9C0B5 715 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 TDP1Q9NUW8 608 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 SLC27A5Q9Y2P5 690 aa11.8□□□□□ -0.52
SNF8-207ENST00000509995 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
SNF8-207ENST00000509995 FLNCQ14315 2725 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 LRRK2Q5S007 2527 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 MTMR11A4FU01 709 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 SGK1O00141 431 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 CDC27P30260 824 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 MRPS21P82921 87 aaKnown RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 RHDQ02161 417 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 TLE3Q04726 772 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 YWHAHQ04917 246 aaPredicted RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 GPR17Q13304 367 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 MTF1Q14872 753 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 ZBTB8OSQ8IWT0 167 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 PGBD3Q8N328 593 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 MAB21L3Q8N8X9 362 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 OSCP1Q8WVF1 389 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 LPIN3Q9BQK8 851 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 OXCT2Q9BYC2 517 aaPredicted RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 FAM124BQ9H5Z6 455 aaPredicted RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 DUS2Q9NX74 493 aaKnown RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 NXF1Q9UBU9 619 aaKnown RBP11.79□□□□□ -0.52
SNF8-207ENST00000509995 SUSD2Q9UGT4 822 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 USP20Q9Y2K6 914 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
SNF8-207ENST00000509995 NID2Q14112 1375 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms