RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 NR1H3Q13133 447 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 PDGFRLQ15198 375 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 TRIM68Q6AZZ1 485 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 DTHD1Q6ZMT9 781 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 C1orf186Q6ZWK4 172 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 DCP1BQ8IZD4 617 aaKnown RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 DAW1Q8N136 415 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 CPA6Q8N4T0 437 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 TSTD1Q8NFU3 115 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 RPLP0P6Q8NHW5 317 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 CCDC26Q8TAB7 109 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 ACDQ96AP0 544 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 TSPAN18Q96SJ8 248 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 PLIN2Q99541 437 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 KIF9Q9HAQ2 790 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 TMEM9BQ9NQ34 198 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 TDP1Q9NUW8 608 aa11.21□□□□□ -0.61
MBD4-208ENST00000509828 POLR3BQ9NW08 1133 aaPredicted RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 ABI2Q9NYB9 513 aaPredicted RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 LARSQ9P2J5 1176 aaKnown RBP11.21□□□□□ -0.61
MBD4-208ENST00000509828 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 CYB561D2O14569 222 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 GIPC1O14908 333 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 HNRNPDLO14979 420 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 MAP3K13O43283 966 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 ARSAP15289 507 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 SPINK2P20155 84 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 DDX6P26196 483 aaKnown RBP eCLIP11.2□□□□□ -0.62
MBD4-208ENST00000509828 CDC25AP30304 524 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 TNFSF9P41273 254 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 IFNAR2P48551 515 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 DHPSP49366 369 aaPredicted RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 DMC1Q14565 340 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 NBR1Q14596 966 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 TXNDC8Q6A555 127 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 CYP2U1Q7Z449 544 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 C11orf74Q86VG3 221 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 CD302Q8IX05 232 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 TMEM161BQ8NDZ6 487 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 SPPL2BQ8TCT7 592 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 C2orf15Q8WU43 125 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 FAM83CQ9BQN1 747 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 TRPC7Q9HCX4 862 aa11.2□□□□□ -0.62
MBD4-208ENST00000509828 DUS2Q9NX74 493 aaKnown RBP11.2□□□□□ -0.62
MBD4-208ENST00000509828 TMEM8BA6NDV4 472 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 PPEF2O14830 753 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 OGTO15294 1046 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 PRPF40AO75400 957 aaKnown RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 KRT18P05783 430 aaKnown RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 AARSP49588 968 aaKnown RBP eCLIP11.19□□□□□ -0.62
MBD4-208ENST00000509828 MAPK7Q13164 816 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 TMEM132DQ14C87 1099 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 ZBTB6Q15916 424 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 SPATA1Q5VX52 437 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 JADE1Q6IE81 842 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 CCDC83Q8IWF9 413 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 C4orf32Q8N8J7 132 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 IGSF22Q8N9C0 903 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 OR10T2Q8NGX3 314 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 PIGKQ92643 395 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 USP13Q92995 863 aaPredicted RBP11.19□□□□□ -0.62
MBD4-208ENST00000509828 CD101Q93033 1021 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 CHFRQ96EP1 664 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 ZCWPW1Q9H0M4 648 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 ZHX3Q9H4I2 956 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 HPS4Q9NQG7 708 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 CCL26Q9Y258 94 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 PCDHB5Q9Y5E4 795 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
MBD4-208ENST00000509828 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
MBD4-208ENST00000509828 LAD1O00515 517 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 CSH1P0DML2 217 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 CSH2P0DML3 217 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 CEACAM1P13688 526 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 ATF6P18850 670 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 GJA4P35212 333 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 TAF6P49848 677 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 SEC13P55735 322 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 NLRP12P59046 1061 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 TSPY1Q01534 308 aa11.18□□□□□ -0.62
MBD4-208ENST00000509828 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms