RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 MMGT1Q8N4V1 131 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 CCDC185Q8N715 623 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 PJA1Q8NG27 643 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 OR5T2Q8NGG2 359 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 NARS2Q96I59 477 aaKnown RBP3.73□□□□□ -1.81
USP53-205ENST00000509769 ERMAPQ96PL5 475 aaPredicted RBP3.73□□□□□ -1.81
USP53-205ENST00000509769 EMILIN2Q9BXX0 1053 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 RXFP1Q9HBX9 757 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 BABAM1Q9NWV8 329 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 MAGED2Q9UNF1 606 aaPredicted RBP3.73□□□□□ -1.81
USP53-205ENST00000509769 C2CD2Q9Y426 696 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 RNF123Q5XPI4 1314 aa3.73□□□□□ -1.81
USP53-205ENST00000509769 QSER1Q2KHR3 1735 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PIGBOS1A0A0B4J2F0 54 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CLRN2A0PK11 232 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ARHGEF37A1IGU5 675 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 FAM172BPA6NC97 362 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 H3BMM5 538 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 STMND1H3BQB6 276 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 hCG_1984214I3L0E3 225 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TULP2O00295 520 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 MAGEB3O15480 346 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 AKAP8O43823 692 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 CCNE2O96020 404 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ZCCHC18P0CG32 403 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ALOX15P16050 662 aaPredicted RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 CNTFP26441 200 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RPL4P36578 427 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 CRKP46108 304 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CHN2P52757 468 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 GNA12Q03113 381 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 C1QBPQ07021 282 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 GRSF1Q12849 480 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP53-205ENST00000509769 IFIT5Q13325 482 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 OCLNQ16625 522 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 NFIL3Q16649 462 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 IMPG1Q17R60 797 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PTPN20Q4JDL3 420 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ZMYM1Q5SVZ6 1142 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 GRHL2Q6ISB3 625 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 BORAQ6PGQ7 559 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PGAP1Q75T13 922 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TAF8Q7Z7C8 310 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TMEM17Q86X19 198 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CDKL3Q8IVW4 592 aaPredicted RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 NUP93Q8N1F7 819 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TDRD5Q8NAT2 981 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 CABLES1Q8TDN4 633 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 STK32AQ8WU08 396 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 GLMNQ92990 594 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TSR2Q969E8 191 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 CCDC126Q96EE4 140 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CEP170P1Q96L14 293 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PPP3R2Q96LZ3 170 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 FNBP1Q96RU3 617 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 NDNQ99608 321 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ZNF184Q99676 751 aaPredicted RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 APOL6Q9BWW8 343 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SLC26A6Q9BXS9 759 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ADNPQ9H2P0 1102 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 STN1Q9H668 368 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 C8orf33Q9H7E9 229 aaPredicted RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 ARMC1Q9NVT9 282 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SLC39A1Q9NY26 324 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 GSTK1Q9Y2Q3 226 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SNX8Q9Y5X2 465 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 MROH7Q68CQ1 1323 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 MAP3K15Q6ZN16 1313 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 KLF18A0A0U1RQI7 1052 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RGSL1A5PLK6 1076 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 G3V2T6 193 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SNAP91O60641 907 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RPN2P04844 631 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 YES1P07947 543 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PRLRP16471 622 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SLC2A5P22732 501 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CASP2P42575 452 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SCTRP47872 440 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 GDI2P50395 445 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 YWHAGP61981 247 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP53-205ENST00000509769 OCRLQ01968 901 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RHAGQ02094 409 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ILF3Q12906 894 aaKnown RBP eCLIP3.72□□□□□ -1.814e-6■■■■□ 20.7
USP53-205ENST00000509769 UGP2Q16851 508 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 PUS10Q3MIT2 529 aaKnown RBP3.72□□□□□ -1.81
USP53-205ENST00000509769 DENND5AQ6IQ26 1287 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ANO7Q6IWH7 933 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 KLHL17Q6TDP4 642 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 SMIM15Q7Z3B0 74 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 EFHBQ8N7U6 833 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RDH13Q8NBN7 331 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 MOSPD2Q8NHP6 518 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 POMGNT1Q8WZA1 660 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 RFKQ969G6 155 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 FAM227BQ96M60 508 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 MAGEB18Q96M61 343 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 CEP295NLQ96MC4 621 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 TUBGCP2Q9BSJ2 902 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 ABCG8Q9H221 673 aa3.72□□□□□ -1.81
USP53-205ENST00000509769 VPS33BQ9H267 617 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms