RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 PALB2Q86YC2 1186 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 MICALL1Q8N3F8 863 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 CDCA3Q99618 268 aaPredicted RBP15.83■□□□□ 0.12
RNF4-213ENST00000509388 SYT15Q9BQS2 421 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 NT5C1AQ9BXI3 368 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 SIK3Q9Y2K2 1263 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 DAAM1Q9Y4D1 1078 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 KIAA1671Q9BY89 1806 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 PER2O15055 1255 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 UCHL3P15374 230 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 ELF1P32519 619 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 NRIP1P48552 1158 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 POLR2FP61218 127 aaKnown RBP15.82■□□□□ 0.12
RNF4-213ENST00000509388 INCA1Q0VD86 236 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 PTPN21Q16825 1174 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 SLC39A12Q504Y0 691 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 INTS6LQ5JSJ4 861 aaKnown RBP15.82■□□□□ 0.12
RNF4-213ENST00000509388 IQCEQ6IPM2 695 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 ELMSAN1Q6PJG2 1045 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 OR10T2Q8NGX3 314 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 MYLIPQ8WY64 445 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 KAT5Q92993 513 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 SPAG5Q96R06 1193 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 NUP58Q9BVL2 599 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 ZCWPW1Q9H0M4 648 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 IGFLR1Q9H665 355 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 SIX2Q9NPC8 291 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 DPP7Q9UHL4 492 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 MTCH2Q9Y6C9 303 aa15.82■□□□□ 0.12
RNF4-213ENST00000509388 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 TBC1D4O60343 1298 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 CLASP2O75122 1294 aaKnown RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 CILPO75339 1184 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 GLUD1P00367 558 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 OR4Q2P0C623 313 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 FOSL2P15408 326 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 PTPN1P18031 435 aaKnown RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 POU3F3P20264 500 aaPredicted RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 PSMC1P62191 440 aaKnown RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 ROR1Q01973 937 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 SMARCB1Q12824 385 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 GPR17Q13304 367 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 RAB33AQ14088 237 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 NFE2Q16621 373 aaPredicted RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 TCEAL5Q5H9L2 206 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 RSPO2Q6UXX9 243 aaPredicted RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 ACOT1Q86TX2 421 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 NLRC5Q86WI3 1866 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 ZNF461Q8TAF7 563 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 TMEM176AQ96HP8 235 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 HEXIM2Q96MH2 286 aaKnown RBP15.81■□□□□ 0.12
RNF4-213ENST00000509388 KREMEN1Q96MU8 473 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 RTP3Q9BQQ7 232 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 STK33Q9BYT3 514 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 NLRC4Q9NPP4 1024 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 GTF3C4Q9UKN8 822 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF4-213ENST00000509388 FHOD1Q9Y613 1164 aa15.81■□□□□ 0.12
RNF4-213ENST00000509388 SCN1AP35498 2009 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 ADAM12O43184 909 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 HCRTO43612 131 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 SRGAP2BP0DMP2 458 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 CD19P15391 556 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 CYP27A1Q02318 531 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 ORC1Q13415 861 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 DRAP1Q14919 205 aaPredicted RBP15.8■□□□□ 0.12
RNF4-213ENST00000509388 DUSP6Q16828 381 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 MDH1BQ5I0G3 518 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 TPGS2Q68CL5 300 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 C4orf50Q6ZRC1 276 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 ADGRD2Q7Z7M1 963 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 SPATA2LQ8IUW3 424 aaPredicted RBP15.8■□□□□ 0.12
RNF4-213ENST00000509388 CRYBG2Q8N1P7 616 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 B3GALNT2Q8NCR0 500 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 IQCDQ96DY2 449 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 TMEM209Q96SK2 561 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 MED10Q9BTT4 135 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 GANQ9H2C0 597 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 DPEP3Q9H4B8 488 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 MTMR10Q9NXD2 777 aa15.8■□□□□ 0.12
RNF4-213ENST00000509388 AFF4Q9UHB7 1163 aaKnown RBP15.8■□□□□ 0.12
RNF4-213ENST00000509388 WDR27A2RRH5 827 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 MYBPHLA2RUH7 354 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 TGM5O43548 720 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 NCK2O43639 380 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 ATP2C2O75185 946 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 NOL4O94818 638 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 TPM1P09493 284 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 ACO1P21399 889 aaKnown RBP15.79■□□□□ 0.12
RNF4-213ENST00000509388 STAT1P42224 750 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 LIN9Q5TKA1 542 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 SMYD5Q6GMV2 418 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 LLGL2Q6P1M3 1020 aa15.79■□□□□ 0.12
RNF4-213ENST00000509388 RBBP8NLQ8NC74 664 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms