RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 POLR3BQ9NW08 1133 aaPredicted RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 KCNG1Q9UIX4 513 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 HELZP42694 1942 aaKnown RBP17.32■□□□□ 0.36
CXCL1-202ENST00000509101 CCDC163A0A0D9SF12 145 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 OGTO15294 1046 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 RNF40O75150 1001 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 NFICP08651 508 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
CXCL1-202ENST00000509101 TUFMP49411 452 aaKnown RBP17.32■□□□□ 0.36
CXCL1-202ENST00000509101 SHC2P98077 582 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 KYAT1Q16773 422 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 PLA2G2CQ5R387 149 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 C9orf57Q5W0N0 161 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 TCEAL6Q6IPX3 200 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 CMTM8Q8IZV2 173 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 SYT2Q8N9I0 419 aaPredicted RBP17.32■□□□□ 0.36
CXCL1-202ENST00000509101 TCEAL3Q969E4 200 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 CHFRQ96EP1 664 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 HHIPQ96QV1 700 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 ZCWPW1Q9H0M4 648 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 CCL26Q9Y258 94 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 PCDHGA5Q9Y5G8 931 aa17.32■□□□□ 0.36
CXCL1-202ENST00000509101 OTOL1A6NHN0 477 aaPredicted RBP17.31■□□□□ 0.36
CXCL1-202ENST00000509101 H0YCG3 227 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 K7ENM7 598 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 ATG13O75143 517 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 KCNK5O95279 499 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 EGFP01133 1207 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 NMT1P30419 496 aaKnown RBP17.31■□□□□ 0.36
CXCL1-202ENST00000509101 AVPR1AP37288 418 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 SLC12A3P55017 1021 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 RUNX3Q13761 415 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 HYIQ5T013 277 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
CXCL1-202ENST00000509101 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
CXCL1-202ENST00000509101 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
CXCL1-202ENST00000509101 THADAQ6YHU6 1953 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 ANAPC1Q9H1A4 1944 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
CXCL1-202ENST00000509101 AKAP3O75969 853 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 CYP11A1P05108 521 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 ADRB2P07550 413 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 ARSAP15289 507 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 BFSP1Q12934 665 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 TMEM132DQ14C87 1099 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 PLK5Q496M5 336 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
CXCL1-202ENST00000509101 PSAPL1Q6NUJ1 521 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 MAB21L3Q8N8X9 362 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 STKLD1Q8NE28 680 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 USP13Q92995 863 aaPredicted RBP17.3■□□□□ 0.36
CXCL1-202ENST00000509101 TSPAN18Q96SJ8 248 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 LSM14BQ9BX40 385 aaKnown RBP17.3■□□□□ 0.36
CXCL1-202ENST00000509101 VPS45Q9NRW7 570 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 ABI2Q9NYB9 513 aaPredicted RBP17.3■□□□□ 0.36
CXCL1-202ENST00000509101 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 IGF2RP11717 2491 aa17.3■□□□□ 0.36
CXCL1-202ENST00000509101 PIRO00625 290 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 PIGRP01833 764 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 METTL23Q86XA0 190 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 CAMKK1Q8N5S9 505 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 SPPL2BQ8TCT7 592 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 ZC3H10Q96K80 434 aaKnown RBP17.29■□□□□ 0.36
CXCL1-202ENST00000509101 REEP2Q9BRK0 252 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
CXCL1-202ENST00000509101 EDEM2Q9BV94 578 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
CXCL1-202ENST00000509101 DSEQ9UL01 958 aa17.29■□□□□ 0.36
CXCL1-202ENST00000509101 ASPMQ8IZT6 3477 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 A0A0B4J269 797 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 ANO9A1A5B4 782 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 CYB561D2O14569 222 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 F11P03951 625 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-202ENST00000509101 PAX3P23760 479 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 NLRP12P59046 1061 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-202ENST00000509101 ELF2Q15723 593 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 TMEM119Q4V9L6 283 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 TXNDC8Q6A555 127 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 LRRTM3Q86VH5 581 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 CD302Q8IX05 232 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 THEM5Q8N1Q8 247 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 RPLP0P6Q8NHW5 317 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 C2orf15Q8WU43 125 aaKnown RBP17.28■□□□□ 0.36
CXCL1-202ENST00000509101 DUSP15Q9H1R2 295 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-202ENST00000509101 KIF9Q9HAQ2 790 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms