RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
CCHCR1-227ENST00000508852 PIAS3Q9Y6X2 628 aa14.65□□□□□ -0.06
CCHCR1-227ENST00000508852 VPS13AQ96RL7 3174 aa14.65□□□□□ -0.06
CCHCR1-227ENST00000508852 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 ZNF233A6NK53 670 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 TISP43B9A030 160 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 EIF3DO15371 548 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CUTAO60888 179 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 HAPLN1P10915 354 aaPredicted RBP14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CD72P21854 359 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 GABRR2P28476 465 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 VIPR2P41587 438 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CCR3P51677 355 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 RPL10AP62906 217 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CSTF1Q05048 431 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 GPR158Q5T848 1215 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 WSCD1Q658N2 575 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 FAM173BQ6P4H8 233 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 ARID3BQ8IVW6 561 aaPredicted RBP14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 EFCAB13Q8IY85 973 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 TOP6BLQ8N6T0 577 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 EXOC4Q96A65 974 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CHRDQ9H2X0 955 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 CRISPLD1Q9H336 500 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 KBTBD4Q9NVX7 518 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 GDAP2Q9NXN4 497 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 AGAP1Q9UPQ3 857 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 R4GN57 208 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 UBE4BO95155 1302 aa14.64□□□□□ -0.07
CCHCR1-227ENST00000508852 LRRN2O75325 713 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 TNNC2P02585 160 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 ITGB3P05106 788 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CSH1P0DML2 217 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CSH2P0DML3 217 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 GJA1P17302 382 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 PCSK1P29120 753 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 POLR2BP30876 1174 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 KPNA1P52294 538 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 AMPD2Q01433 879 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 DUOXA2Q1HG44 320 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 DGKKQ5KSL6 1271 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 POTEHQ6S545 545 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 GAREM2Q75VX8 874 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 ERMP1Q7Z2K6 904 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 RALGPS2Q86X27 583 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 MAML2Q8IZL2 1156 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CSGALNACT2Q8N6G5 542 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CELF5Q8N6W0 485 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CEP295NLQ96MC4 621 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 HINFPQ9BQA5 517 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 PANK2Q9BZ23 570 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 KIF9Q9HAQ2 790 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 PRMT8Q9NR22 394 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 F5P12259 2224 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 COL4A2P08572 1712 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 ZNF292O60281 2723 aa14.63□□□□□ -0.07
CCHCR1-227ENST00000508852 DENND4CQ5VZ89 1909 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 GVINP1Q7Z2Y8 2422 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 SDHBP21912 280 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 AVPR1AP37288 418 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 KCNA1Q09470 495 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 MAPRE1Q15691 268 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 PDILTQ8N807 584 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 C1orf127Q8N9H9 656 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 ZBTB44Q8NCP5 570 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 BPIFB1Q8TDL5 484 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 NELL1Q92832 810 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 SAAL1Q96ER3 474 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 FUBP3Q96I24 572 aaKnown RBP eCLIP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 TMEM209Q96SK2 561 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 LMAN1LQ9HAT1 526 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 DDX43Q9NXZ2 648 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 ABI2Q9NYB9 513 aaPredicted RBP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 FAM13BQ9NYF5 915 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 EHD2Q9NZN4 543 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 CFAP45Q9UL16 551 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 NDRG2Q9UN36 371 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 SPTBN4Q9H254 2564 aa14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 ZNF638Q14966 1978 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-227ENST00000508852 TULP1O00294 542 aaPredicted RBP14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 ARNTLO00327 626 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 KRT19P08727 400 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 FAM163BP0C2L3 166 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 ID4P47928 161 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 CASP5P51878 434 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 BFSP1Q12934 665 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 FZD5Q13467 585 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 C4orf50Q6ZRC1 276 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 ZNF687Q8N1G0 1237 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 TMEM130Q8N3G9 435 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 PDCL2Q8N4E4 241 aa14.61□□□□□ -0.07
CCHCR1-227ENST00000508852 MRPS31Q92665 395 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms