RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 BBOF1Q8ND07 529 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 SGSM3Q96HU1 749 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 SERPINB12Q96P63 405 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 BEGAINQ9BUH8 593 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 NUP85Q9BW27 656 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 CDT1Q9H211 546 aa11.69□□□□□ -0.54
SH3RF1-203ENST00000508685 DCDC2CA8MYV0 355 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 FSCN2O14926 492 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 HOXC6P09630 235 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 CXCL8P10145 99 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 MYBL1P10243 752 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 PYGMP11217 842 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 PHKA2P46019 1235 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 SCTRP47872 440 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 GRIK4Q16099 956 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 SNCBQ16143 134 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 CCL14Q16627 93 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 AMHR2Q16671 573 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 MORN1Q5T089 497 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 ACAD10Q6JQN1 1059 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 KRT35Q92764 455 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 CPB2Q96IY4 423 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 SELENOSQ9BQE4 189 aa11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 GEMIN8Q9NWZ8 242 aaKnown RBP11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
SH3RF1-203ENST00000508685 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 THSD7BQ9C0I4 1608 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TLDC2A0PJX2 215 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 GPR25O00155 361 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 SHBGP04278 402 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 CFHP08603 1231 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 CLTAP09496 248 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 SLC8A1P32418 973 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 GSCP56915 257 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 PPP1R7Q15435 360 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 DGKDQ16760 1214 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 PPP1R2P3Q6NXS1 205 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TMEM270Q6UE05 265 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 ZNF677Q86XU0 584 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 NLRP7Q8WX94 980 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 SEMA4AQ9H3S1 761 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 AVENQ9NQS1 362 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TMEM110-MUSTN1A8MSY1 372 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 DNM1LO00429 736 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 MAGEB2O15479 319 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TCEA3O75764 348 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 RARAP10276 462 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 BPIFB4P59827 614 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 MYL6P60660 151 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TMEM62Q0P6H9 643 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 C2CD6Q53TS8 623 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 OLFML2BQ68BL8 750 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 GBP7Q8N8V2 638 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 MDM1Q8TC05 714 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 BTBD6Q96KE9 485 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 FOXP3Q9BZS1 431 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 SETD4Q9NVD3 440 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 PRMT7Q9NVM4 692 aaPredicted RBP11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 TNFSF13BQ9Y275 285 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 COL1A2P08123 1366 aa11.67□□□□□ -0.54
SH3RF1-203ENST00000508685 MGAMO43451 1857 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 GAS8O95995 478 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 KCTD19Q17RG1 926 aaPredicted RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 DUOXA2Q1HG44 320 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 CLEC16AQ2KHT3 1053 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 CYB5D1Q6P9G0 228 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 CPNE8Q86YQ8 564 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 PASD1Q8IV76 773 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 CPA5Q8WXQ8 436 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 MYCBPQ99417 103 aaPredicted RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 IMPG2Q9BZV3 1241 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 ADAM7Q9H2U9 754 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 SLC5A4Q9NY91 659 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 GNEQ9Y223 722 aaKnown RBP11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 PCDHB4Q9Y5E5 795 aa11.66□□□□□ -0.54
SH3RF1-203ENST00000508685 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms