RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 OCA2Q04671 838 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 SP140Q13342 867 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 ADRM1Q16186 407 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 ATP2B3Q16720 1220 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 MUM1Q2TAK8 710 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 COLEC12Q5KU26 742 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 STRA8Q7Z7C7 330 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 DRC7Q8IY82 874 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 PQLC1Q8N2U9 271 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 BOLLQ8N9W6 283 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 RNF31Q96EP0 1072 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 REXO4Q9GZR2 422 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 TSPY26PQ9H489 355 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 LDAHQ9H6V9 325 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 IFT122Q9HBG6 1241 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 MED4Q9NPJ6 270 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 DMRT3Q9NQL9 472 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 ARGLU1Q9NWB6 273 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 SLC52A1Q9NWF4 448 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 CTNNA3Q9UI47 895 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 MAST3O60307 1309 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 ZFYVE9O95405 1425 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 A0A1B0GTW7 788 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 CCDC196A0A1B0GTZ2 297 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 CCDC78A2IDD5 438 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 PLIN1O60240 522 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 NEMFO60524 1076 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 TPM1P09493 284 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 NEFHP12036 1026 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 CYP2C19P33261 490 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 ALDH1A3P47895 512 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 TOR2AQ5JU69 321 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 ZKSCAN2Q63HK3 967 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 FAM180AQ6UWF9 173 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 CCDC112Q8NEF3 446 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 LMBR1Q8WVP7 490 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 FATE1Q969F0 183 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 SYT17Q9BSW7 474 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 ACE2Q9BYF1 805 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 SENP6Q9GZR1 1112 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 PANK3Q9H999 370 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 DONSONQ9NYP3 566 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 TLK1Q9UKI8 766 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.25□□□□□ -1.572e-8■■■■□ 25.8
PDLIM5-211ENST00000508531 AATKQ6ZMQ8 1374 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 MYOM2P54296 1465 aa5.25□□□□□ -1.57
PDLIM5-211ENST00000508531 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 PIK3C2GO75747 1445 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 DCCP43146 1447 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 PRSS23O95084 383 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 POMCP01189 267 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 IL2RBP14784 551 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 ATP5JP18859 108 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 FGFR4P22455 802 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 SLC6A2P23975 617 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 MCM2P49736 904 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 SCAND1P57086 179 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 PPP3CAQ08209 521 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 SLFN5Q08AF3 891 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 UBXN2BQ14CS0 331 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 ZRSR1Q15695 479 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 GPR162Q16538 588 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 FAM98AQ8NCA5 519 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 KIF18AQ8NI77 898 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 CAGE1Q8TC20 777 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 PPM1EQ8WY54 764 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 SLC9A6Q92581 669 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 RNPEPQ9H4A4 650 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 GREM2Q9H772 168 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 ALG13Q9NP73 1137 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 VTA1Q9NP79 307 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 LANCL2Q9NS86 450 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 RBM12Q9NTZ6 932 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 RSPH14Q9UHP6 348 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 SIK3Q9Y2K2 1263 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 METP08581 1390 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 KANK1Q14678 1352 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 GPRASP1Q5JY77 1395 aa5.24□□□□□ -1.57
PDLIM5-211ENST00000508531 ELP1O95163 1332 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 CCDC171Q6TFL3 1326 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 ADGRB3O60242 1522 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 SLIT2O94813 1529 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 EIF2AK4Q9P2K8 1649 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 DHX16O60231 1041 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 CAVIN2O95810 425 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 ZNF853P0CG23 659 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 MTHFD2P13995 350 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 HSPA6P17066 643 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 FPR1P21462 350 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 GCSHP23434 173 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 U2AF2P26368 475 aaKnown RBP eCLIP5.23□□□□□ -1.573e-9■■■■■ 33.8
PDLIM5-211ENST00000508531 GUCY1A2P33402 732 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 TDO2P48775 406 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 CXADRP78310 365 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 HSD11B2P80365 405 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms